Coregonus clupeaformis (lake whitefish): 121578256
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Entry
121578256 CDS
T08357
Symbol
tfe3b
Name
(RefSeq) transcription factor E3b
KO
K09105
transcription factor E3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121578256 (tfe3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121578256 (tfe3b)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121578256 (tfe3b)
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
COX16
Motif
Other DBs
NCBI-GeneID:
121578256
NCBI-ProteinID:
XP_041748412
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Position
12:43008843..43018149
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AA seq
450 aa
AA seq
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MSSRVLLRQQLMREQAQEQERREAQQQASVAQLRATDSTPAISVTLPPMAARPPPTQVPV
EVLKVQTHLENPTKYHIQQSQRQQVKQYLSTTLGDKVAPQTPGVSPLPLSSSAPEMAPTA
LSAPNSSMALLNLGSNKEEIDGVIDDIISLESSFNDDFMTLIDLGLQLPSTLPGNLLDVY
HSPGMAAPTLTVSNSCPADLTSIKREYSDTKALVKERQKKDNHNLIERRRRFNINDRITE
LGSIIPKSSDPEMRWNKGTILKTSVDYIRKLQKEQQRAKEVEMRQKKLEHANHSLMLRIQ
ELEMQARLHGLSSPVSHGLSSDPSLLQQQHLQQGDHTLGPSTGEACSQTFLSLGAAAMAQ
PVPTSFLSPPSSDSPVGVTISSPLDLGSLSFPELDDPSNAGLYLDVGLGDILMDEECTLS
PERMDPLFFVSPGASKTSSRRSSFSMEEDL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacgcgtgctgcttcggcagcagctgatgcgggaacaagcccaggaacaagag
agacgggaggcccagcagcaggcctctgtggctcagctcagggcaactgactccacccct
gcaatctctgtcactctgcccccaatggctgctcgccctccgcccacacaggtgcccgtg
gaggtgttgaaggtgcagacccatctggagaaccccaccaagtatcacatccagcagtct
cagaggcagcaggtgaagcagtatctctccaccaccctcggcgataaggtggcacctcag
accccgggtgtgtctcccttgccactgtctagctctgcccctgagatggctcccacagcc
ctcagtgctccaaacagctcaatggctttactcaacctgggatccaacaaagaggagata
gatggcgtaattgacgacatcatcagccttgaatcaagtttcaatgatgacttcatgacg
ttaattgacttgggtctacagctgcctagtacgctccccggtaacctcctggatgtatac
catagtcctggaatggcagcacctaccctcactgtcagcaactcctgccctgcagatctg
accagtattaaaagggaatactctgataccaaagcgctggtgaaagaaagacagaagaaa
gacaaccataacctcattgagaggaggcggaggtttaacatcaatgaccgcataacggag
ctggggtccataataccaaagtcaagtgatccggagatgcgctggaataagggcaccatt
ctgaagacctcggtggactacatcaggaagctgcagaaggagcagcagagagccaaggag
gtagagatgcgtcagaagaagctggaacatgctaaccacagcttgatgctgcgcatccag
gagttggagatgcaggctcggctccatggcctctccagcccggtgtcccatggcctgagt
tcagacccctccctcctccagcagcagcaccttcagcagggagaccatacactggggccc
agcactggagaggcctgctcccaaacctttctcagcctcggggccgcagccatggcacag
cctgtccctacctccttcctctccccaccctcctctgactccccggtgggtgtgaccata
agcagccccctggacctgggcagtctgagcttccctgagctggatgacccctccaatgct
gggctgtacctagacgtggggttgggggacatcctcatggacgaggagtgcacactgtcc
ccagagaggatggacccgctgtttttcgtgtcaccaggtgcctcaaagaccagcagtcgt
aggagcagcttcagcatggaggaggacttgtag
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