Coregonus clupeaformis (lake whitefish): 121578725
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Entry
121578725 CDS
T08357
Name
(RefSeq) tumor necrosis factor receptor superfamily member 4
KO
K05142
tumor necrosis factor receptor superfamily member 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121578725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121578725
04090 CD molecules [BR:
cclu04090
]
121578725
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121578725
CD molecules [BR:
cclu04090
]
Proteins
121578725
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
121578725
NCBI-ProteinID:
XP_041749045
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Position
12:complement(47659470..47661843)
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AA seq
293 aa
AA seq
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MMILSKFWVLIYLCIFTCNGFLNPVAAAYQCKKGERISRSRHNKELCEPCPDESFQAVPN
ESQQCQPCHSCVEDTGSEVISKCSKTSDVICQCRRGFTNRVKDSSRCKCATGSGLDTSGI
IPVCRECEHGFFTTGMDSTCAKWRECRSGVKIPGTTMSDVICNEESEPEGKTLPSMQPTS
PSGSIQTLSKSLIQNQSQGSSPHPNVPTVTPALTGHKSSTADYSQVMTLIGIVLLLTFLL
TAVTYNLVIIPCINNYKNPVVRTAQDSMCRRPVEESGDSSLSSLVKPPSLGEP
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcctgtctaaattctgggtgctcatctatttatgtatttttacttgtaatgga
tttttaaatcctgtggcggctgcttaccaatgcaaaaaaggtgagaggataagtaggtct
agacataacaaggaactgtgtgaaccgtgccctgacgagtccttccaggcagtaccaaat
gaatctcagcaatgtcaaccctgccactcctgcgttgaggacactgggagtgaggtaata
tcaaagtgctcaaagacttctgatgttatatgtcagtgtcgtagaggattcactaacagg
gtcaaagactcttcgcgatgcaagtgtgccacgggttctgggctggatacatcaggaata
ataccagtatgccgtgaatgtgagcatggattctttactaccggcatggactctacatgt
gcgaaatggcgagaatgtaggagtggagtgaagattccgggcactacgatgtcagatgtg
atctgtaatgaagagtccgagccagaggggaagaccctcccatccatgcagcccacttcc
ccctctggctctatccagaccttatctaagtcattgatccagaaccagagccaagggtca
tctcctcatcccaatgtccccactgtaacaccagccctcactggtcacaagtcctcaacg
gcagactacagccaagttatgacactcattggaattgtcctgctgcttacttttctactt
accgctgtgacctacaacctggtcatcattccttgcatcaacaactacaagaacccggtt
gtcagaacagctcaggactcaatgtgccggaggccagttgaagaaagtggggacagcagt
ctctcttccctggtaaaaccaccaagcttgggggagccatga
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