Coregonus clupeaformis (lake whitefish): 121580402
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Entry
121580402 CDS
T08357
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121580402 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121580402 (mmp2)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
121580402 (mmp2)
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M10
121580402 (mmp2)
BRITE hierarchy
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_4
Reprolysin_3
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
121580402
NCBI-ProteinID:
XP_041751351
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All DBs
Position
15:complement(19451516..19473069)
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AA seq
659 aa
AA seq
DB search
MGCHTAFSPRHLVLKVVLVQLIAFLQKTSAAPSPIIKFPGDDSPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDPKTVEIMKKPRCGVPDVAQYNFFHRKPKW
QQNAITYRILGHSPDLDEETIDDAFLRAFKVWSDVTPLKFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFMF
MGTEYNSCTNQGREDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNADGAPCKFPFTFQG
ETYDGCTTQGRDDGYRWCATTENYDNDKSYGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YDSCTASGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPMYTFTKNFRLSNDDIKGIQELYGPGTDKPLSPTQGPVTPMDICNEPVVFDAIAQIR
GETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYENPLEEKTVFFAGNEMWI
FNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAGDKFWRYNEAKKKMDPGF
PKLIADSWNGIPDDVDSAFSLNGIDYTYFFKGAHYFKMDDSSLKIVKLGEITKDWLGCH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccacacggcatttagcccccgacaccttgtcctcaaagtggttttggtacag
ttaatcgcctttctccagaaaacctctgcagccccctcgcccattatcaagttcccagga
gacgatagtccaaaaacagacaaagaagtggctctgcactatctgaacaagttctatggc
tgcccacaagacagatgtaacctcatggtgctgaaggacaccctgaagaagatgcagaag
ttcttctcgctgcaagagacgggcgagatcgaccccaagacggtggagatcatgaagaag
ccccgctgtggcgttccagatgttgcacaatacaacttcttccacaggaaacccaagtgg
cagcaaaacgccataacctacaggattctaggccattctcctgacctggacgaggagact
attgatgacgccttcttaagggccttcaaagtgtggagtgatgtcaccccactcaagttc
acccgcctcatggatggagaggctgacatcatgattaactttggccgcaacgagcatggt
gatggctaccccttcgatggtaaagatggtctgctggctcatgctttcgctcctggacca
ggcaccgggggagactcccactttgatgatgatgagcagtggaccctgggagaaggacaa
gtggtgaaggtgaagtttggtaatgcagagggggagttctgtaagttccccttcatgttt
atgggaacggagtacaacagctgtaccaatcagggccgtgaagatggattcctctggtgc
tccaccacatacaactttgacgacgacggcaaatacggtttctgtccccatgagttgctg
ttcaccctgggtggaaacgcggacggagctccatgtaagttccccttcacgttccaaggg
gagacctatgatggttgcaccactcaggggcgtgacgacggctaccgctggtgtgctacg
actgagaactatgacaatgacaagtcctacgggttctgccctgaaacagccatgtccact
gtgggaggaaactctgagggttccccctgtgtgttccccttcacattccttggagacact
tatgacagttgcaccgcttctggacgtagcgacggcaaaatgtggtgcgcctccaccaag
agctacgacgatgaccgcaagtggggcttctgtcctgatcaaggctacagtctgttcctg
gttgcggcccatgagtttggccatgccctgggcttggagcactcccaggaccctggtgct
ctgatggcccccatgtacaccttcaccaagaacttcagactgtccaacgacgacatcaag
ggaattcaggagctgtatggtcctggtacagacaagcccctttctcccacccagggccca
gtcactcctatggacatctgtaatgaacctgtggtgtttgatgctattgcccagatcaga
ggagagaccttcttcttcaaggacaggttcatattcaggtcaaccaacttccggggcaag
ccttcaggtcccatgctggtagccacctactggcctgagctccccgtcaccatcgacgct
gcctatgagaacccactggaggagaagactgtgttctttgcaggcaatgagatgtggatc
ttcaatgcggaccaaatagagaaaggctaccccaagagaatctcctctataggcctgccc
acagacctgaaaggcattgacgcagccttctccttcggaaagagccagaagacctacctg
ttcgctggagacaagttctggaggtacaatgaagccaagaagaagatggaccctggcttc
cccaagctcatcgctgactcctggaatggaatcccagatgacgttgactctgcctttagt
ctgaatggcattgattacacatacttcttcaaaggtgcccactacttcaaaatggatgac
agtagcctgaagatcgtcaaactgggcgagattacaaaggactggctgggttgtcactaa
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