Coregonus clupeaformis (lake whitefish): 121581105
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Entry
121581105 CDS
T08357
Name
(RefSeq) nectin-4 isoform X2
KO
K06593
poliovirus receptor-related 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121581105
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121581105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121581105
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Nectin family
121581105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
Protocadherin
Stevor
TMEM154
He_PIG
DUF975
RIFIN
Adeno_E3_CR2
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
121581105
NCBI-ProteinID:
XP_041752419
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Position
14:26447984..26457836
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AA seq
563 aa
AA seq
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MKLPVWDQSQSEAAWLVLWAFAACVRGGFVEPPPSFSLRSLTEAETRLPCQFQVQEDEQV
VQVSWIKELPDGTKEHIITVHRTEGHTEFGQYSGRVRFESSRPMVNSALLILITEESDEG
KYICHISTFPYGNFERKLSLTVWTFPISSLDPVVLEEGQSFRVAASCRSVARPPPRLTWD
TDLPGQAQNRSSESGAVSTHFSLHPLRSMNGMRLDCLVWHPALEQPRRISNRLVVQFPPD
ASVTGFDGNWYMGLKGVELRCESGGNPKPKNFTWTRDGKALPDGLTVDGERLLFGRALRQ
NDTGVYECVVNNGVGTRKVEYNITVTETSRSVQGMIVDTLVMIIIGLAAGVLVIIMIIMI
ILVNRYQRRKNSKLEMELSKRMLEINTLSRQASSRRLNSVSTDPRGQNEDYILLRLDGRM
KNSLMSLEDHPIYKGSQSTLGGRWGTVGKGDLDHLGRPVLYQSSWRECRESMRGAEMEGE
REERRRRVESYLKSSNMSLDSGLPSSLVPMKPQDQDGSVGPTDIPPMLSDLGGQREGVTE
GEDWGHRQDMLEVDEADCDTSSY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacctgtctgggaccagagccagtcggaggcagcgtggttggtgctatgggca
tttgcagcgtgtgtgaggggtgggtttgtggagcctcctccatccttctccctgcgttcc
ttgacggaggctgagacgcggctgccctgtcagtttcaggttcaggaggacgagcaggta
gttcaggtcagctggatcaaggagctacctgatggcaccaaggaacatatcatcaccgtc
caccgcacagagggacacacagagtttgggcagtattctggaagagtaaggtttgagagc
agtcgccccatggtgaactctgctctgctcatcctgatcactgaggagtctgatgagggg
aaatacatctgtcacatcagcacattcccctatgggaacttcgagaggaagctgtcactc
actgtgtggaccttccccatctcctctctggacccagtggttctggaggagggccagtcc
ttccgcgtggctgcctcctgccgctccgtggcccgccctccaccccgcctgacctgggac
acggacctccctggccaggcccagaaccgcagctcagagagcggggccgtgtctacccac
ttctccctgcaccccctgaggagcatgaatggcatgcggttggactgcctggtctggcac
cctgctctggaacaaccccgcaggatcagcaaccgcctggtggtgcaatttcccccagat
gcatctgtcaccggctttgatggaaactggtacatgggactgaagggagttgaactccga
tgtgagtctggaggaaaccccaaaccaaaaaacttcacctggaccagggatggtaaggct
ctgccagatggcctgactgtggatggagaaaggcttctgtttggccgagccctgagacag
aatgacactggagtttatgaatgtgtggtgaacaacggtgttgggacaaggaaagtagaa
tataacatcacagttacagagacatcgcggagtgtgcagggaatgatcgttgacactcta
gtgatgatcattataggtctggctgctggggtgttggtcatcatcatgatcatcatgatc
attttagtcaaccgataccaaagacgcaaaaacagcaaattagaaatggagcttagcaaa
aggatgttagaaatcaacactctctccagacaggcctcctccaggagactcaactctgtc
agcacagaccccagaggacagaatgaagactatatactactcagactagacggtagaatg
aaaaacagcctaatgtcccttgaggaccatcccatctacaaaggcagtcaatccaccctt
ggtgggaggtgggggacggttggaaagggtgatttggaccacctaggccgtcccgtcctg
taccagtctagctggcgcgagtgcagagagagtatgaggggggctgagatggagggagaa
agggaagagcgcagacgaagggtggagtcgtacctaaagagcagcaatatgtccctggac
tctggccttccttcctcccttgtccccatgaagccccaggaccaggatggcagtgtgggg
cccacagacatccccccaatgctcagcgacctgggtggccagagggagggcgtgaccgaa
ggggaagactggggccacagacaggacatgctggaggttgacgaggctgactgtgacacc
agttcatactag
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