Coregonus clupeaformis (lake whitefish): 121584069
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Entry
121584069 CDS
T08357
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121584069
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121584069
BRITE hierarchy
Motif
Pfam:
SNF
NADH_dh_m_C1
Motif
Other DBs
NCBI-GeneID:
121584069
NCBI-ProteinID:
XP_041755831
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Position
16:complement(17304181..17329943)
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AA seq
593 aa
AA seq
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MTRQDSAAPAGSLSTQGPSNAGYNTNPVPVPVITQTDTRDKWSKKMDFLLSVIGFAVDLG
NVWRFPYICYQNGGGAFLIPYIVMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKG
IGYAICVISLYVSFYYNTIIAWALFYFYSSFASVLPWTNCDNAWNTENCTNYFLKDNVTW
NNYSRSPAEEFYTRNVLEIHKSDGLRNVGGVRWQLMLCLFLIFTIVYFSLWKGVKTSGKV
VWVTATLPYVVLFILLIRGATLPGAWKGVVFYLQPKWEKLFETSVWVDAAAQIFFSLGPG
FGVLLALSSYNPFTNNCYRDAIVTSLVNCLTSFMSGFVIFTMLGYMAEKRNVNVEDVARD
KGPSLLFITYPEAIANMTGSTFFAIIFFVMMITLGLDSTFGGLEAIITAVMDEYPEYLAH
RRELFVLGLVVVCFLGSLSTLTNGGAYVVKLLEEFGVGSSIIAVGFLEAIAVSWFYGITR
FSNDIKSMLGYYPGLFWKVCWVAISPAFLAYIIVSSLLKPPPLQLFDYKYPDWSITVGYI
IGASSFMWIPIYMVYKLVWTPGSLKQRLAVCLRPERTIMPEIHADSLNMSPVP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccaagactcagcggccccagcgggaagcttgagcacccagggcccctcaaac
gccggttacaacaccaaccctgtgccggtacctgtgatcacacagacggacacacgagac
aaatggagcaaaaagatggattttcttttatcagtcattggcttcgcggtagacttggga
aatgtgtggagatttccatacatttgttaccaaaacggaggcggggctttcctaatcccc
tacattgtaatggcgatctttggaggggtgccactcttttacatggaactggcactggga
cagttccacagaactggtgccatatccatatggaaacacatatgccccatcttcaaaggc
atcgggtatgcgatctgtgtcatctccctctatgtctccttctactacaacaccatcatc
gcctgggcactcttctacttctactcctccttcgccagtgtcctgccctggaccaactgt
gacaatgcctggaacactgaaaactgcaccaactacttcctgaaagacaacgtgacctgg
aacaactactccaggtcacctgctgaggaattttacacgaggaatgttctggagatccac
aagtccgatgggctgcgtaacgtggggggtgttcgctggcagctgatgctctgcctcttc
ctcatcttcactattgtttacttcagtctctggaagggagtgaagacatcagggaaggta
gtgtgggtgacggccaccttgccctatgtggtgctcttcatcctgttgatccgtggtgcc
accctaccaggtgcatggaagggagtggtcttctacctccagcccaagtgggagaaactc
ttcgagaccagtgtgtgggtagatgctgcggctcagatcttcttctccctggggccaggc
tttggggtgctccttgccctctccagctacaaccccttcacaaacaactgttatcgtgat
gccatagtgaccagcctggtgaactgcctgaccagcttcatgtctgggtttgtgatcttc
actatgctggggtacatggcagagaagagaaatgtgaatgtggaggatgtagccagagac
aaaggtccaagcctactcttcatcacctatccagaggccatagccaacatgacaggatca
acgttcttcgccatcatcttcttcgtgatgatgatcactcttgggcttgacagcacgttc
ggaggactggaggctatcattacggctgtgatggatgaataccctgagtacttggcgcac
agacgggagctatttgtactgggcttggtcgttgtgtgctttttgggctccctcagcacc
cttaccaatggtggggcctatgtggtgaaactgctggaggaatttggggtgggttcctcc
atcattgctgttggttttcttgaggccatcgccgtttcctggttctatggtatcacaaga
ttcagcaatgacattaaatccatgttaggctattatccgggattattctggaaggtgtgc
tgggtggctatcagtcctgcatttctagcgtatataatagtgagctccctgctcaaacct
cccccactccaactctttgactacaaatacccagactggagcatcacggtgggctacatc
atcggtgcctcctccttcatgtggatccccatctatatggtctacaagctggtgtggacc
cccggatcactgaaacagcgcctagctgtgtgtctgagacctgagaggaccattatgcca
gagatccacgcagactccctcaacatgagtcctgttccatag
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