Coregonus clupeaformis (lake whitefish): 121584691
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Entry
121584691 CDS
T08357
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121584691
BRITE hierarchy
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
121584691
NCBI-ProteinID:
XP_045081663
LinkDB
All DBs
Position
16:complement(42543172..42590777)
Genome browser
AA seq
2525 aa
AA seq
DB search
MHPFFVKLTFLLSLIVLTRGLRCSMSTELCLNLGRCEATADGNGECKCRDGFVGNRCQHR
DPCTYSPCKNGGSCHVVPNGSSVESTCFCRPGFTDRLCLTPIDNACLSSPCRNGGTCDLV
NLREYKCRCPPGWSGKQCQQADPCASNPCANGGQCTPFESHYICSCTPFFYGQTCKQDVN
ECAQSPSPCKNGGVCVNEVGTYRCQCPQEYTGKHCDTRYLPCNPSPCHNGGTCVQKGDTT
YECSCVPGFSGQNCDTNIDDCPGHECHNGGTCVDGVNTYNCQCKPEFTGQFCTEDVDECQ
LMPNACQNGGTCHNIYSAYQCVCVNGWTGDDCGENIDDCANAACDQRAICHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPLGYFGAACDQDVDECSLGG
NPCEHGGKCLNTKGSFQCKCQPGFSGARCEHDVNECLSNPCQNEATCLDQIGGFHCICMP
GYEGLFCQINTDECANNPCLNNGKCIDKINTFHCQCPTGFAGYLCQIDIDECASTPCKNG
AKCTDGPNKYTCECTEGYTGQHCETDINECFSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCRNGGICQDRENSYICTCPKGTAGINCEVNLDDCKSKPCDYGTCLDKIN
GYECACEPGYSGTMCNINVDECALNPCHNGGTCIDGINSFTCLCPEGYHDATCFAQVNEC
LSNPCIHGHCQDKVNGYHCLCDNGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCSCR
IGFTGPSCQTNINECASNPCLNQGTCIDDVSAYKCNCLLPYTGENCETLLAPCSPKPCKN
GGVCQESEDYERFSCVCPEGWQGQTCEVDINECVKNPCLNGATCENTKGNYRCGCKAGYT
GRNCETNIDDCKPNPCSNGGFCRDEVDNFVCTCLPGFRGTKCEEDINECDSNPCKNGANC
TDCVNSYTCTCPPGFGGIHCENNTPDCTESSCFNGGTCLDGINTYTCLCPPGFTGSYCQH
DINECDSRPCLNGGTCQDSYGTYKCNCPQGYTGLNCQNLVRWCDSSPCKNGGTCWQTGTT
YSCECQTGWTGLYCDVPSVSCEVAAKQRGVEVVALCRNSGQCLDSGNTHYCHCQAGYTGS
YCEEQVDECIPNPCQNGATCTDFLGGYSCKCVPGYVGTNCSNEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINIDDCNPFTDPITNEPKCFNKGKCVDRVGGYHCICPAGYV
GERCEGDVNECLSNPCDTRGTHSCIQLTNNYRCDCRTGYTGQRCDTVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPGYTGSTCEYDAHSCGSLHCRNGGTCLSGNKSPKCLCPSSFTG
PECEFPTDSPCNTNPCYNGGICEYSSEAPYYHCVCPTNFNGLLCHILDYSFLGGFGRDIT
PPPEVEVSCEIPQCEERKGNKFCDTLCNNHACGWDGGDCSLNFNDPWKNCTSSLQCWRYF
NDGKCDEQCNNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLAVGRLVIVVHIMPDQLRNNSFGFLRELSRVLHTNVVFRQDAKGEMMIYPYY
GSEQELNKHNIKRSVGWTEIPGTMLSSMKNSLYTIANGNRRRRRELDPMLIKGSIVYLEI
DNRQCFQQSTECFQSATDVAAFLGALASSGNLNIPYIIEAVHSEVDPQPPSELYPIYVVL
AGLALLAFVGVGMVASRKRRREHGQLWFPEGFKTSEPNKKKRREPVGEDSVGLKPLKNPS
DISLMDDNQNEWGEEEPSDAKRFRQFEEQAMLDLDDQTDHRQWTQQHLDAADLRIPSIAP
TPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDSSANVISDFIYQGAN
LHSQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGKTPLHAAVAADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVN
NVEAATVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRD
IAQERMHHDIVRLMDEYNLVRSPPMHSHGHGGSMGTTLSPPLCSPNSYLGSMKPLVQSKK
ARKHSAKGIGCKDSKDLKNKKKTSQDGKGGSLLDSSAVLSPVDSLESPHGYISDVASPPM
MTSPFQQSPSMSLNHLQGMSDPHMGVNHMGMPNKQELARMQFDPLPPRLTHLPLSGSNGS
GGMNGQCDWLSRMHASMGHSGQFNAMRVGPVGGQGGLHQGGGQHGMMTSLHTGLPTTSLS
QMLSYQGLQNTRLASQPHPMQQAQQQMQQQMQHQQNLQQQLQQQQQSIQLQHQNSNTGSS
GHASSQNFISTELSGSEIQQGTGNQGSMPIHTILPQETQIMSQNLPSTQYLTPPSQHSYS
GPMDNTPNLQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSSMQSQIGHI
PDQFK
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctttctttgtgaaactaactttcctgttgtcgctgattgttctaacacgaggc
ttaagatgctctatgtccaccgagttgtgtttgaacctggggaggtgtgaggccacagct
gatggaaatggagagtgcaagtgtcgggatggattcgtaggaaacaggtgtcagcaccgg
gacccctgcacctactctccgtgtaaaaatggcggctcgtgtcacgtggtgcccaatggg
agctcagtggaatccacgtgtttctgccgaccgggcttcacggaccgcctgtgtctgacg
ccaatcgacaacgcctgtctcagctctccctgccggaacggtggcacctgcgatctggtc
aacctccgagagtacaagtgtagatgtccccctggctggtcaggcaagcagtgccagcag
gcagacccctgtgcctctaacccctgtgccaacggcggacagtgcacccccttcgagtcc
cactacatctgttcctgcacccccttcttctacggacagacctgcaagcaggacgtcaat
gagtgtgcccagagcccctcgccatgcaagaacggaggggtgtgtgtgaacgaagtgggc
acctaccgctgccagtgtccccaggagtacacaggcaagcactgtgatacccgctaccta
ccctgcaacccctccccctgccacaacggcggcacctgcgtccagaagggagacaccacc
tacgaatgctcctgtgtgccaggtttctcgggtcagaactgtgacactaacattgacgac
tgtccaggacacgagtgtcacaatggaggaacctgtgtggacggggttaacacctataac
tgccaatgcaaaccagaattcacaggccagttctgtacagaggacgttgatgagtgccaa
ctgatgcccaacgcgtgccagaacggtggaacgtgccataacatctacagtgcctaccag
tgtgtctgtgtcaatgggtggacgggtgatgactgtggagagaatattgacgattgcgcc
aatgctgcctgcgatcagcgtgccatctgccacgaccgtgtggcgtcctttttttgcgag
tgtccccatggtcgcacaggtctgctgtgtcacctggatgacgcctgtatcagtaacccc
tgtcagaaaggctccaactgtgacaccaaccccgtcaacggcaaggccatctgcacctgt
ccccttggctactttggcgccgcctgtgaccaggatgttgacgagtgctcactgggtggc
aacccctgtgagcatggagggaagtgcctgaacaccaagggttcgttccagtgtaagtgt
cagcccggcttctctggggctcgctgtgaacacgatgtcaacgagtgcctctccaacccc
tgccagaacgaagccacctgccttgaccagataggaggtttccactgcatctgtatgcca
ggctacgagggactgttctgccagatcaatacggatgagtgcgccaacaacccctgcctg
aacaatgggaaatgtatcgacaagatcaacaccttccattgccagtgccccacaggcttt
gctgggtacctttgccagatagatattgatgagtgtgccagcacgccttgcaagaatggc
gccaagtgcacggacggccctaacaagtacacctgtgaatgcactgaaggttacacgggg
caacactgtgagactgacatcaatgagtgtttctcggacccctgtcactatggtacctgt
aaggatggcctggcctccttcacctgctactgtcgccctggttacacgggccggctgtgc
gagaccaacattaacgagtgtctgagtcagccctgtcggaacggaggcatctgccaggac
cgcgagaactcctacatctgcacctgccccaagggcactgcaggtataaactgtgaagtc
aacctggacgactgcaagagcaagccatgtgactacgggacatgcctcgacaagatcaac
ggctacgagtgtgcctgcgagcccggctatagcgggaccatgtgcaacatcaacgttgac
gaatgtgccctcaacccgtgtcacaacggtggcacctgcatcgatggcatcaacagcttc
acctgtctgtgtccagagggttaccatgacgccacctgcttcgcccaggtcaacgagtgc
cttagcaacccatgtatccatggccactgtcaggacaaagtcaatggttaccactgtctg
tgtgacaatggctggagtggcaagaactgtgacatcaacaacaacgagtgtgagtccaac
ccctgcatgaacggaggcacctgcaaggatatgaccagcggatatgtctgctcctgcaga
atcggcttcactggtccaagctgtcagaccaacatcaacgaatgtgcctccaacccctgc
ctgaaccaagggacctgcatcgatgatgtctctgcctacaagtgcaactgcctactgcca
tatactggtgagaactgtgagaccctgctggcaccctgcagccccaagccctgtaagaac
ggaggtgtgtgtcaggagtctgaagactacgagaggttctcctgtgtgtgtccagaaggc
tggcaaggccagacctgtgaagtggacattaacgagtgtgtgaagaacccctgtctcaat
ggggccacctgcgagaacaccaaaggcaactaccgctgtggctgcaaggctggctacact
ggccgcaactgtgagaccaacattgatgactgcaagcccaacccctgcagcaatggaggt
ttctgtcgggatgaggtggacaactttgtgtgcacctgcctgcctggtttccgtggcact
aagtgtgaggaggacatcaacgagtgtgacagtaacccatgtaagaatggagccaactgt
acagactgtgtcaacagctacacctgcacctgtccacctggcttcggtgggatacactgt
gagaacaacacacctgactgcactgagagctcctgtttcaatggtgggacgtgtttggac
ggcatcaacacctacacctgcctgtgcccacctggcttcactggcagctactgccaacac
gacatcaacgagtgtgactccagaccctgcctgaacggaggcacctgccaggacagctat
ggcacctacaagtgcaactgtccccagggctacactggactcaactgccagaatctggta
cgctggtgtgactcgtccccctgtaagaacgggggcacatgttggcagactggcactact
tacagctgtgagtgccagaccggttggacagggctctactgtgatgtgccaagcgtctcc
tgcgaggtggcagccaaacagagaggtgtggaggtagttgctctgtgtcgtaactcaggc
cagtgtctggattcagggaacactcactactgccactgccaggcgggctacacaggcagc
tactgtgaagagcaggtggatgagtgcatccccaacccctgtcagaacggagccacctgc
actgacttcctaggagggtactcctgcaagtgtgtgccgggatacgtcggtaccaactgc
tccaatgagatcaatgagtgtttctcccagccgtgccagaacggaggcacctgcattgac
ctgatcaatacctacaaatgctcctgtcccaggggaacccaaggcgttcactgtgagatc
aacatagacgactgcaaccccttcacggaccccatcaccaacgagcccaagtgcttcaac
aaggggaagtgtgtggacagggtgggaggttaccactgcatctgtcccgccggctacgtt
ggggagcgctgtgagggggacgtcaacgagtgcctgtccaacccatgtgatacccgtggg
acacacagctgcatccagctcaccaacaactaccgctgtgattgccgaactggatacaca
ggccagcgttgtgacacagtgtttgacggctgtaagggcaaaccctgtcgtaacggcggg
acatgtgccgtagctagcaacactcctcacggcttcatctgcaagtgtccacctggctac
actggctccacctgtgagtacgatgcccactcctgtggcagtctccactgtcggaacggt
ggcacctgcctctccggaaacaagagccccaagtgtctatgcccgtcctcgttcacgggg
ccagagtgtgaattccctacagacagcccctgtaacaccaacccctgctacaacggggga
atctgtgagtacagctcagaggctccatactaccactgcgtatgccccaccaacttcaac
ggcctgctatgtcacatcctggactacagcttcctgggtgggttcggccgtgacatcact
cccccgccggaggtggaggtgagctgtgagatcccccagtgtgaggagaggaaggggaac
aagttctgtgataccttgtgtaacaaccacgcgtgtggctgggacgggggcgactgctcg
ctcaacttcaacgacccgtggaagaactgcacgtcgtccctgcagtgctggcgttacttc
aatgacgggaagtgtgacgagcagtgcaacaacgccggctgtctctatgatggctttgac
tgtcagaacctggagggccagtgcaaccctctatacgaccagtactgtaaagaccactat
gcggacggccactgtgaccagggctgcaacaacgctgagtgtgagtgggatggtctggac
tgtgccaacaacatgccagagaagctcgcggtgggccgcctggtcatcgtggtccacatc
atgcccgaccagctccggaacaactcgtttggcttcctgcgcgagctgagccgcgttctc
cacaccaacgtggtgttccggcaggacgccaagggagagatgatgatctacccgtactac
ggcagtgagcaggagctgaacaaacacaacataaagcgctcagtgggctggacagagatc
cctggcaccatgctcagctccatgaagaacagcctgtatactatagccaatggaaacaga
cgcagacgcagggagctggaccccatgctgatcaaaggctccatagtgtacctggagatt
gacaaccgccagtgctttcagcagtccacagagtgcttccagagtgccaccgatgtagca
gccttcctgggggccctggcctccagtggaaacctcaacattccctacatcatagaggct
gttcacagtgaggttgacccccagcctccgtcggagctttaccccatttacgtggtcctg
gccgggctggccctcctggctttcgtgggagtggggatggtcgcctcacggaagcgtcgt
cgcgagcacggccagttgtggttcccggagggtttcaagaccagtgagcccaacaagaag
aagaggagggagccggtgggggaggattcagtggggttgaagccactgaaaaacccctcg
gacatatcactgatggacgacaaccagaatgaatggggagaagaggagccttcggacgcc
aaacgctttaggcagtttgaggagcaggcgatgctggacctggatgaccagacagaccac
cgccagtggacccagcagcacctagacgcggctgatctccgtatcccctccatcgccccc
acaccccctcagggcgagatcgagaatgactgcatggacgtcaacgtacggggaccagat
ggcttcacccccctgatgatcgcctcctgcagtggtggaggtctagaaacaggcaacagc
gaggaggaggaagactcctctgccaacgtgatcagtgatttcatttaccagggtgctaac
ctccacagtcagacagaccgcacaggggagaccgcccttcatctcgctgcccgctacgcc
cgctctgatgctgccaagcgtcttctggaggccagtgcagatgccaacatccaggacaac
atgggcaagaccccgttacacgctgccgtggctgctgacgcacagggcgtcttccagatt
ttgatcaggaatcgtgccacagacctggatgcccgcatgcacgatggcaccacccctctg
atcctggcagcccgcctggcagtggagggcatggtggaggagctcatcaactgccatgct
gacgtcaacgctatcgatgacttcggcaaatctgctctgcactgggcagcagcagtgaac
aacgtggaagcagctaccgtactactgaagaatggagccaacaaggacatgcagaacaac
aaggaggagacccctctgttccttgctgccagggaaggaagctacgagacggccaaggtc
ctgctggagcactttgctaaccgcgagataactgatcacatggaccggctgccccgagac
atagcgcaagagaggatgcaccatgacatcgtccgtctcatggacgagtacaacctggtc
cgcagcccgcccatgcacagccatggccatggaggctccatgggcaccaccctatcccct
cctctctgctcccccaacagctacctgggcagcatgaagcccttagtccagagcaagaag
gcacgcaagcacagcgccaagggcatcggctgcaaggacagcaaggacttgaagaacaag
aagaaaacctcccaggatgggaagggaggaagtctgttggacagctcagctgttctgtcc
cccgtggactcccttgagtctccacacgggtatatctctgacgtggcgtcccctcccatg
atgacttcccccttccagcagtccccgtccatgtcgctcaaccacctccaggggatgtcc
gacccccacatgggggtcaaccacatgggcatgcccaacaagcaggagctagcgcgcatg
cagtttgacccgcttccgccccgtctcacccaccttcccttgtcaggctccaacggctct
gggggcatgaatggccagtgtgattggctctccaggatgcacgccagcatgggccattcc
ggacagttcaacgccatgagggttggtcctgtcggggggcagggcggtctgcaccagggg
ggcgggcagcacggcatgatgacctctctccacaccgggcttcctaccaccagcctgtcc
cagatgttgagctaccagggtctgcagaacacccggctggcctcgcagccccaccccatg
cagcaggcccagcagcagatgcagcagcagatgcagcaccaacagaacctgcagcagcag
ctccagcaacagcaacagagcatccagctgcagcaccagaactctaatactggcagcagt
ggccatgccagcagccagaacttcatcagcaccgagctgagtggttcagagatccagcag
ggcacagggaaccagggctccatgcccatccacaccatcctgccccaggagacccagatc
atgagccagaacctgcccagcacccagtaccttacccctccatcccagcatagctactcc
ggccccatggacaacacccccaacctccagctacaggtccctgaccacccctttctgacc
ccctcccccgggtctcctgaccaatggtccagctcatccccgcattctaacatgtctgac
tggtcggagggtatctcaagtccaccaaccagcagcatgcagtctcagatcggacatatc
cccgaccagttcaagtag
DBGET
integrated database retrieval system
