Coregonus clupeaformis (lake whitefish): 121586619
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Entry
121586619 CDS
T08357
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121586619
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
121586619
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121586619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_9
SH3_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
121586619
NCBI-ProteinID:
XP_041759389
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All DBs
Position
17:45795277..45816951
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AA seq
945 aa
AA seq
DB search
MMTSHGKLRMQRGSLYEYDSQIKDLRAQLCDQIKVLDGQVEVKGQQLSDLSEFFRRRGDI
EAEYARALDKLTERFTLKTKRKEQSGQSVSQCWSVLLTQTRAESREHAALSDSCSHTLTQ
RLTHCSEDTHRLAKRSKEVGVQMQDELLKVTTELQTALRTYHQYHTDSLTAEGKLKEATR
LEERQTGKSAELGITQSGGQRRSSVKKMEKMMEKRHGRVQETQLKCTKARNDYLLNLAAA
NATMNKYYLQDLSTLIDCTDLGFHLSLERVMRSYLASRGRVLKAEEAGLKQLEQEVTSLD
QGGDRDALLQNHDTAFCLPFRFSYHPHEGDQVSEVSAESQVRYELETRFQQLQSRLSTET
LETEEVSKTLKATLSALLDNMCDSDSNPPPDLPISLSHDPMGAATASKLALAKRRANQQE
TETFYFTKVKEYLTGSSLISKLQAKHDLLQEAIEKAKAIDSDPSRMQCARSVRVRRSRPC
SMYSHTLFTSDMLGFIQSSGQQIPVVVESCIRFINLHGLHHEGIFRVPGSQREVNHIRDA
FERGEDPLADSDCDIDSVAGVLKLYFRGLDPPLFPDEYYTELLDCVQNEGLAEKAAQIKS
VVSSFPRPLLIVIRYLFAFLNHVSQYSDENMMQPYNLAVCFGPSLLRGSDSGDVVARQPQ
VTDLVKTMILQYDVIFPSQSELPGPVYEKHMTLEQEYCEPITEEADGETEQFHSEDEWEA
VAMFDYTARSATELSFKQGDPLLLHSKASSDWWRGEAGGVKGLIPHKYISVLEGAERGRR
DEVSGGSTGNLASEELQTENTTRLRVNSDSASLPGRQRAAEGSSSPVRKNPLSPVTRQNT
GNQERRHTLDSVRQRTGAIERQTDGGSIERPDISKQMNSVFKELLSRQPSLHSAATQTPP
FSSSSSSSSLPSSSSSSSSLSSSLPGGRKVGFSLRGRALFRPADQ
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgatgacatcacatggaaagctgaggatgcagagagggagtctgtacgagtatgactcc
cagatcaaagacctgcgggcccagctgtgtgaccagatcaaggttctggacggtcaggtg
gaggtcaaaggtcaacagctgtctgacctgtccgagttcttccgtcgtcgtggcgacatt
gaggcggagtacgcccgcgccctcgacaaacttacagagaggttcaccctgaagaccaag
aggaaggaacagagtggtcagtcggtgtctcagtgttggtcagttttgttgactcagaca
cgtgcagagagcagagaacatgcagcgctgagtgactcctgctcacacactctcacacag
cgactcacacactgctcagaggacacacaccgcctggcaaaacggagtaaggaggtggga
gttcagatgcaagatgagctactgaaggtcaccactgaactgcagacggctctgaggacc
taccaccagtaccatacagacagtctgacagcggaggggaaactaaaggaagccacacga
ttggaggaaagacagacgggcaagtcagctgaactggggataacacaatcgggaggccag
aggcggagctctgtgaagaagatggagaaaatgatggaaaaaagacatggcagagtgcag
gagacccagctgaagtgcactaaggctcgtaacgactatctgctgaatctggctgctgca
aacgcaactatgaacaagtattatctacaggatctcagcacactcatagactgtactgac
ctggggttccacctctccttggagcgagtgatgaggtcatacctggccagcagggggcgt
gtcctgaaggctgaggaggcaggtctgaagcagctggaacaggaagtaacatcactggat
cagggcggagacagagacgctctactacagaaccacgacacagcgttctgtctgcccttc
cgcttcagttaccatccccatgagggagaccaggtgagcgaggtgagtgcggagagccag
gtgaggtatgagttagagaccaggttccaacagctccagtcccgcctctccaccgaaacc
ttggaaacagaggaggtcagtaagacactcaaagccaccctctccgcgctattggacaat
atgtgtgacagtgacagtaaccctccccctgacctgcccatcagcctatcacacgacccc
atgggagccgccaccgcctccaaactagcccttgccaagcggagagccaatcagcaggaa
acagagacgttctactttacgaaagttaaggagtatctgactggaagctccctgatctcc
aaactacaggctaaacatgacctgctgcaggaggccatagagaaagctaaggccattgat
agcgacccctccagaatgcagtgtgctaggtcagtgcgtgtgcggaggtccagaccctgt
tccatgtacagccacactctcttcacctctgatatgctgggtttcatacagagttcaggg
cagcagattcctgtggtggttgaaagctgcattcgcttcataaatctccacggtctgcac
catgaggggatattccgtgttccagggtcccagagagaggtcaaccacatcagggatgct
tttgagcgaggagaggaccctctggcagacagtgactgtgacattgattcggtggctgga
gtgttgaagctgtacttcagaggactggacccgccgctgttccctgacgaatactacaca
gaactattggactgtgtccagaacgagggattggcagagaaagcagctcagataaagtca
gttgtctcctccttccctcggccgctccttatcgtcatacgttacctcttcgcttttctc
aaccatgtgtcccagtacagcgatgagaacatgatgcagccctataacctggcggtgtgt
ttcgggccaagcctcctgagagggtcggattctggtgatgttgtcgctaggcaaccgcag
gtcaccgacctcgtcaagaccatgatcctccagtatgatgtcatcttcccgagccaatca
gagctgcccgggcccgtgtacgagaagcacatgactctggagcaggagtactgtgaacca
atcacagaggaggcagatggggagactgaacaattccacagtgaggatgagtgggaggcg
gtggccatgtttgattacaccgcgcggtctgctactgagctgtcctttaagcagggggat
ccactccttctgcacagcaaggcctcttctgattggtggagaggggaagcgggaggagtt
aagggcctcataccgcataaatacatcagtgtgttggaaggagcggagcgagggaggagg
gatgaggtcagtggaggaagcactggaaacctggcttcagaagagcttcagactgagaac
acgacccggctgcgggtgaacagtgacagtgcttcgttgcctgggagacagagggcagcg
gagggcagcagcagccccgtccgaaagaaccctctctcccccgtgacacgccaaaacaca
gggaatcaggagcgtaggcacaccttggacagtgtgaggcagaggacaggagccatagag
agacagacagatggaggatctattgaaagaccggacatcagtaaacagatgaactctgtc
ttcaaggagcttctctctcgccagccgtccctacattctgctgcaacccagacacctccc
ttctcttcctcctcctcctcctcctccctcccttcctcctcctcctcctcttcatccctc
tcctcctctctcccaggaggcaggaaggtggggtttagccttagagggcgggctctcttc
agaccagcggaccaatag
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