Cronobacter condimenti: AFK62_19555
Help
Entry
AFK62_19555 CDS
T04060
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon00540
Lipopolysaccharide biosynthesis
ccon01100
Metabolic pathways
ccon01250
Biosynthesis of nucleotide sugars
Module
ccon_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AFK62_19555 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ccon01005
]
AFK62_19555 (rfaD)
Enzymes [BR:
ccon01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AFK62_19555 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ccon01005
]
Core region
AFK62_19555 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
ALB64575
UniProt:
K8AFJ6
LinkDB
All DBs
Position
4251174..4252106
Genome browser
AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDIGYTDILVVDNLKDGTKFVNLVDLNIADYMDKEDFQVQI
MSGEEFGEIEAVFHEGACSSTTEWDGKYMMENNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQITGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDNFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADAALAFHKKGSLEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttaccggcggcgcgggttttatcggcagcaacattgttaaggctctgaac
gacatcggctataccgatatcctggtggtggataacctcaaggacggcaccaagttcgtt
aacctggtggatctgaacatcgctgattacatggataaagaagatttccaggtacagatc
atgtccggcgaagagttcggtgagattgaggcggtgttccatgagggcgcctgctcttcc
accaccgagtgggacggcaagtacatgatggaaaacaactatcagtactccaaagagctg
ctgcactattgtcttgagcgtgaaatcccgttcctgtacgcctcttctgccgccacctat
ggcgggcgcacttctgacttcattgaatcccgtgaatatgagaagccgctgaacgtctac
ggttactctaagttcctgttcgacgaatatgtccgccagatcctgccggaagcaaattcg
caaatcaccggctttcgctatttcaacgtctacgggccgcgtgaaggtcacaaaggcagc
atggcgagcgtcgcgttccacctcaacacccagttgaacaacggcgaaagcccgaaactg
ttcgaaggcagcgataatttcaaacgcgattttatctacgtgggcgatgtggccgcagtg
aacctgtggttctggcagaacggcgtctccggtattttcaactgcggcaccggtcgtgcg
gagtcgttccaggcggtagcggatgcggcgctggccttccataaaaaaggcagccttgaa
tacattccgttcccggaaaaactcaaaggccgttatcaggcgttcacgcaggcggatctc
actaatctgcgcgcggcgggctacgacaagccgtttaaaaccgttgccgaaggcgtgacg
gaatatatggcctggctgaaccgcgacgcgtaa
DBGET
integrated database retrieval system
