Chondrus crispus (carragheen): CHC_T00001673001
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Entry
CHC_T00001673001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00970
Aminoacyl-tRNA biosynthesis
ccp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHC_T00001673001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccp01007
]
CHC_T00001673001
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccp03016
]
CHC_T00001673001
Enzymes [BR:
ccp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
CHC_T00001673001
Amino acid related enzymes [BR:
ccp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
CHC_T00001673001
Transfer RNA biogenesis [BR:
ccp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CHC_T00001673001
Prokaryotic type
Other AARSs
CHC_T00001673001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
17320394
NCBI-ProteinID:
XP_005712678
UniProt:
R7Q2T0
LinkDB
All DBs
AA seq
488 aa
AA seq
DB search
MFIDFGYAKKMGGECILRFDDTNPTVEKTEYIDAIKEMVKWLGHEPAKITFSSDYFDQLY
DLAVELIKRGKAFVCHQTGEEISRDRKDGVESPYRNRSVEENLRLFTDMRKGKYAEGEAT
LRMKIDMKCANLVMRDPVAYRILHSPHPHVGDKWCVYPSYDYTHCIVDSLEWVTHSLCTL
EFEIRRDSYYWLLEALDLYRPFVWESARLNLQYTVMSKRKLKQLVENNIVRGWDDPRMPT
LVGMRRRGYPPAALNRFCSAVGISRATNVIGMHVLEYWVRSELDANAKRVLAVLRPLRLI
ITNFRGEEKVTVANHPKNAGMGSREIKLSRTLYIDEMDFRMEDSKGYYGLAPGKTAMLRY
AYPVKIVKVVTGDNGKPCELMGEFDYQKCSKPKGVLHWVGEDSVDFEARLYSTLFKSEDP
SSLNNEWLEDLNEEGEVVVDGAKIESSAVSSDVRTTFQFERTGYFTVDNDSTAKKPVFNM
TVSLRDSR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttcattgactttggctatgcaaagaaaatgggcggagagtgcattttgcgctttgat
gacacaaatccaaccgtggagaagactgaatatatcgacgccataaaagagatggtgaag
tggttgggccacgaaccggccaagatcacattcagctcggattatttcgatcaattgtat
gatctagctgtcgaattgatcaagcgcggtaaagcttttgtatgccatcagacgggagaa
gaaatttctcgtgaccgcaaagatggagtcgagtcgccttatcggaaccgctctgtggaa
gagaacttgaggctattcacagacatgcgaaagggaaagtatgcggaaggcgaagcaact
ttgcgtatgaagatagacatgaaatgcgctaacctggtcatgcgtgatccagtagcatat
cgaatattgcattcccctcatcctcacgtcggagacaaatggtgcgtgtatccttcttac
gattacacgcattgtattgtggattcactggaatgggttacacactcactttgcacatta
gagtttgaaattcgtcgcgactcgtactactggttactggaggctctggatttgtatcgg
ccgttcgtatgggaatcggcccgtctcaatttgcagtacactgtgatgtcaaagcgaaag
ctcaaacagttggtggaaaacaatattgtaagagggtgggacgaccccagaatgccaaca
cttgttgggatgcgtcgcagagggtaccctccagctgctttaaatcgattttgctctgca
gttgggatttcgagggcaaccaacgtcatcgggatgcacgtcctggaatattgggtacga
agcgaattagacgcaaatgcaaagcgtgtgctggcagttttgagaccgctgcgactaatc
attaccaattttagaggagaggagaaagttactgttgccaaccacccgaagaatgctgga
atgggaagtcgggaaatcaaattgtcaaggacgctgtatattgacgagatggatttcaga
atggaagacagtaagggttactacgggttggcacccgggaaaacggcgatgctccgttac
gcttaccctgtgaaaattgttaaggttgtgacaggagataatgggaaaccatgtgaatta
atgggcgagtttgactaccaaaaatgtagcaaaccgaaaggagttcttcattgggttggg
gaggatagcgttgactttgaagcgcgattatacagcacgctattcaaatctgaagacccg
tcgtctctgaacaacgaatggcttgaggatctcaatgaggaaggggaggttgtggttgat
ggggcgaaaattgagtctagtgcagtgtcgagcgatgttcgtacgacgttccagtttgag
cgtactgggtacttcactgtagataacgattccactgcgaaaaagcctgttttcaatatg
acagtctcgctccgggattcgaggtag
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