Chondrus crispus (carragheen): CHC_T00002318001
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Entry
CHC_T00002318001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00906
Carotenoid biosynthesis
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CHC_T00002318001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
CHC_T00002318001
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
17321109
NCBI-ProteinID:
XP_005713399
UniProt:
R7Q892
LinkDB
All DBs
AA seq
698 aa
AA seq
DB search
MAGLQSSAGASATRVSRVNSGARIRTDVEGSRTTPQEARLPFSATRTQVHVELRLAGAEA
QQKQGVLEVIGSQLSQSTAVLEKAASATSAAPPTSLAITAHPNCAPALVVHNITWPAIGT
RVPTVPPGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAVGLEVCATAVYPTTTVYAGPHKISLDRPYLRVDRLMLKSRLL
ARCVEGGVRLCRAIVRDVAHVSESESQVHFGPAPADTVLPTFDEFEDVAEELVVRAKTVV
DCTGHALRFTKTEPENRFRAPWAQAAYGIEAEVESYPYEQDEMLLMDFRDEHMQAEERWK
RESNERPTFLYVFPTGEKQAFFEETSVIAPTAVSFEELKERLYRRLEHDGVKVKRVIEEE
RSLIPMGGSLPSRAQRVVGFGGAACLVHPATGYMVARTVSMADTVARTIAEGLGESGGGG
FRAMAVSEAVWKVTWSLELRRQRDFLGFGAELLGVLDMYESRRFFEAFFALPRGLWSKFL
GFGLGTPLDRTYFALYFFAIADGRIRWSLLKGIVEIGRWGLIRSVLPLWMSALDESYILL
RFLRIQSCYRGVLQEAIAENKHVKEIVLKVAKKRAVLI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttgcaatcgtccgccggcgcaagtgcgacacgtgtgtcacgtgtgaatagt
ggtgcacgaatacggacagatgttgagggtagccgcacgacgccgcaagaagccaggctg
cctttctcagccacgaggacacaggtacacgtagagctacggctggcaggagcagaagcc
cagcagaagcagggagtgctggaagtgatcgggtcgcaactgtcacagagcactgcagta
ttggaaaaggctgcgtctgcgacatctgccgccccgccaacgtcccttgccattactgcg
catccgaactgtgcaccggcccttgtagtgcacaacatcacttggcccgccatcgggaca
cgcgtccctacagtaccccccggagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgccgtcggc
ctggaagtctgcgccaccgccgtctaccccaccaccaccgtgtacgcaggcccgcacaag
atctcgctcgaccgcccgtacctgcgcgtcgatcgcctcatgctcaagagccgcctgctt
gcgcgctgcgtcgagggcggcgtcaggctgtgccgcgctatcgtgcgcgacgttgcccac
gtatcggagagcgagtcccaggtccactttggcccggccccggcggacaccgtcctgccc
acgtttgacgagtttgaggacgtcgcggaggagctcgtggtgcgtgcgaagaccgtggtg
gactgcacgggccacgcgctgcgctttactaagacggagccggagaaccgcttccgcgcg
ccgtgggcgcaggcggcgtacgggatcgaggcagaggtggagagctatccgtatgagcag
gatgagatgctgctgatggactttagagacgagcacatgcaggcagaggagaggtggaag
agggagagcaatgagcggccgacgtttctgtacgtgtttcccacgggggagaagcaggcg
ttcttcgaggagacgtctgtgatcgcgccgacggcggtgtcgttcgaggagctgaaggag
cgcctgtaccgcaggctggaacatgacggggtgaaggtgaaacgggtgatcgaggaggag
cggtcgctgatcccgatgggcgggtcgctgccgagccgggcgcagcgggtggtggggttt
ggcggggcggcgtgtctagtgcaccctgcgacggggtacatggtggcgcggacggtgtcg
atggcggacactgtggcgcggacgatcgcggaggggctgggcgagagcggcggcgggggg
ttccgggccatggccgtgtccgaggcggtgtggaaggtgacgtggagcctggagctgaga
cggcagcgcgactttctcgggttcggggccgagctactgggcgtgctggacatgtacgag
tcgcgacggtttttcgaggcgttcttcgcgttgccccgcgggctgtggagcaagtttttg
gggttcgggctgggcacgccgctcgaccggacgtactttgcgctgtactttttcgcgatc
gcggacgggcggatccggtggagcctgctgaaagggattgtggagatcgggcggtggggc
ctcatccggagcgtgctgccgctgtggatgtcggcgttggacgagagctatatattgtta
aggtttctgcgtattcaaagctgctatcgtggtgttctgcaagaagctattgccgaaaac
aagcacgttaaggaaatagtgctcaaggtagcaaaaaaaagagctgtcctcatatga
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