Chondrus crispus (carragheen): CHC_T00008326001
Help
Entry
CHC_T00008326001 CDS
T02916
Name
(RefSeq) serine palmitoyltransferase, LCB1 subunit
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00600
Sphingolipid metabolism
ccp01100
Metabolic pathways
Module
ccp_M00094
Ceramide biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
CHC_T00008326001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccp01007
]
CHC_T00008326001
Enzymes [BR:
ccp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
CHC_T00008326001
Amino acid related enzymes [BR:
ccp01007
]
Aminotransferase (transaminase)
Class II
CHC_T00008326001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
17324904
NCBI-ProteinID:
XP_005717188
UniProt:
R7QH13
LinkDB
All DBs
AA seq
485 aa
AA seq
DB search
MSARALLHPVQELRHMLATSLNLSPADIYYHAIEFAFLSLVIYLALTRAYEPWNRAAPAQ
LTDAQVAEKLAAWKPAPLAAPLSQQEKDALPLDLTTYHDAFGNFRVNGKDNVTDMATCNF
LGLLKDPTVEEKCLATMKEYGCGACGPRGFYGTTDIHLECEEKIAAFSGTETAILYSFGS
ATGNSTIPAFCKRGDLVVCDDSLNYSLQLGVKLSRAEAIRFKHNDMADLERILKEVTDGD
VADPGRRKIQRRIIIVEGIYQNVGDLCPLDEVVALKEKYLFRVMLDESFSLGVLGKTGRG
ALEHFGIKRELVDIATADLGNAIASVGGFCVGSEDVVKHQRLSGAGYCFSASQPPFLAMA
ASVALDIVSERGETFVSRLRDNVDTFRKQLNIHSLKQAGWYVDGHQLSPLLHIRAYDDTL
PLATFTTLQKKCLDNDVLIARPVYAQSEVNPPKPCVRVTVSVVHSERELQKAATVIRQVL
LSSRS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagagcactattgcacccagtgcaagagctgcgtcacatgttggccacgtct
ctgaatctctctcctgctgacatttactaccacgccatcgaattcgcctttctctcgctc
gttatctacttggctctcacacgggcatatgagccatggaatcgagcagctccggcccag
ttgacggatgctcaagtcgccgaaaagctcgcggcttggaagccagcaccgctcgccgcg
cctttatctcaacaagaaaaagatgctctccctctcgatttgactacatatcacgatgca
ttcggaaatttccgagttaacggcaaggataacgtaacagatatggcgacttgcaatttt
cttgggttgttgaaggatcccacagtggaggaaaaatgtcttgcaactatgaaagaatat
gggtgcggggcttgtggcccgcgagggttctatggtactacagacatacatctggagtgt
gaggagaaaatagcggcgttttcgggaacagagacggccatcttatattccttcgggtcg
gccacgggcaattcaactatccccgcgttctgcaagcgtggcgacctggttgtctgtgac
gattctttgaactactcgttgcagctaggcgtgaagctcagtcgcgcggaggcgattcgt
ttcaagcacaatgatatggctgatctggaacgtattttgaaagaagtcacggacggtgac
gtcgcggacccagggcggaggaagattcagcgtcgcatcatcattgtcgaaggcatctat
cagaacgtcggggacctatgtccactagacgaagtcgtcgctctcaaggagaagtatctt
ttccgcgtgatgctggacgagtccttctcgctgggtgtgctgggcaaaacaggacgcggt
gccctcgagcactttggcatcaaacgcgagctcgttgatattgccacggcagatctagga
aatgcaatcgcatcggtagggggtttttgtgtgggaagcgaggatgtagtcaaacatcag
cgcctttccggggcaggatattgtttctccgcttcgcaacctccctttcttgccatggcc
gcatccgtcgctctggatattgtttcagaacgaggcgagacgtttgtgtcgcgattgcgc
gataacgtagatacattccggaaacagcttaacattcactcgctcaagcaagctggctgg
tacgtggacggccatcaattgtcccccctcttgcacattcgggcttatgacgatacgttg
ccgctagctaccttcacaacactgcaaaagaagtgtctggataacgacgttttgatcgct
agaccagtttacgcacagtctgaggtcaacccgccaaagccgtgcgtgcgagtgacagtt
tccgtggttcactcagagcgagagttgcaaaaagcggcaacggtcattcggcaggtcttg
ttgtccagtagatcgtag
DBGET
integrated database retrieval system
