Chondrus crispus (carragheen): CHC_T00008401001
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Entry
CHC_T00008401001 CDS
T02916
Name
(RefSeq) Tryptophan synthase subunit beta
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00260
Glycine, serine and threonine metabolism
ccp00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
ccp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CHC_T00008401001
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
CHC_T00008401001
Enzymes [BR:
ccp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
CHC_T00008401001
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Paralog
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
17326918
NCBI-ProteinID:
XP_005719198
UniProt:
R7QL95
LinkDB
All DBs
AA seq
466 aa
AA seq
DB search
MTAATKITLSESELPTHWYNIVPDLPHAPAPPLDPATHQPLPASALSSLFPPALVEQEVT
RERYVPIPAQVRDIYKLWRPTPLVRARRLERALNTPARIFYKYEGGSPSGSHKPNSAVPQ
AFYNARAGTTRLFTETGAGQWGSALAFACTQFDLPCAVYQVRASYDAKPYRRTLMRLWGA
DVRPSPSPHTAAGRGVLAADPRTPGSLGIAIAEAVEDAARVPGAKYALGSVLNHVLLHQT
VIGEEALLQMRKADASPDVLLGCTGGGSNFAGLSFPFLREKWAGGHDATVRCVEPAACPS
LTRGEYRYDFGDAVGQTPLLKMHTLGHSFVPDAIHAGGLRFHGMAPLVSQLLHEGVVEAE
AIGQTECFEAGRLFAKCEGVVAAPEPTHAIAATLREAARAKETGDETNILLAVCGHGLLD
LAAYDKLLDGSLVDFEYPREKVSKAMASVPNVRQEERDKAASGTAP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcgaccaaaattacgctctccgagtccgagctgcccacgcactggtataac
atagtccccgacctgccgcacgcgcccgcgcctccgttggaccccgccacgcaccagccg
ctgcctgcgtccgcgctgtcgtcgctgttcccgccggcgctagtcgagcaggaggtcacg
cgcgagcgctacgtcccgatccccgcccaagtgcgcgacatctacaagctgtggcgcccg
accccgctggtgcgcgcgcgtcgcctcgagcgcgccctcaacaccccggcccgcatcttc
tacaagtacgagggcggcagcccgtcggggagccacaagcccaactcggccgtgccacag
gccttctacaacgcccgcgccggcaccacccgcctcttcacggagaccggcgcgggccag
tgggggagcgccctcgccttcgcctgcacccagttcgacctgccgtgcgccgtgtaccag
gtccgcgccagctacgacgcaaagccctaccgccgcaccctcatgcgcctctggggcgcc
gacgtgcgccccagcccgtcgccgcacaccgccgccggccgcggcgtcctcgctgccgac
ccgcgcacgccaggctcgctgggcatcgccatcgcagaggccgtcgaggacgcagcccgc
gttcccggtgccaagtacgccctcggctccgtcctcaaccacgtcctgctccaccagacc
gtcatcggcgaggaggccctgctgcagatgcgcaaggccgacgcgtcgccagacgttctg
ctgggctgcacgggcggcggcagcaactttgccggcctgagcttcccgttcctgcgcgaa
aagtgggcgggcgggcacgatgccaccgtgcgctgcgtcgagcccgccgcatgccccagc
ctcacgcgcggcgagtaccgctacgactttggcgacgccgtcgggcagacgccgctgctc
aagatgcacacgctcggccactcgttcgtgccggacgccatccacgccggcggcctgcgc
ttccacggcatggcgccgctggtgagccagctgctgcacgagggcgtggtcgaggcagag
gccatcgggcagaccgagtgcttcgaggctggccgcctgtttgcaaagtgcgagggcgtg
gtcgccgcgcccgagcccacgcacgccatcgcggccacgctgcgcgaggcggcgagggca
aaggagaccggcgacgagaccaacatcctgctcgccgtgtgcgggcatggcctgctcgac
cttgctgcgtacgacaagctcctggatggaagcctcgtcgacttcgagtacccgcgcgaa
aaggtcagcaaggccatggccagcgtgccgaacgtgcggcaagaagaacgcgacaaggca
gcgagcggcacggcaccttga
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