Caulobacter vibrioides CB15: CC_2408
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Entry
CC_2408 CDS
T00049
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ccr
Caulobacter vibrioides CB15
Pathway
ccr00362
Benzoate degradation
ccr01100
Metabolic pathways
ccr01120
Microbial metabolism in diverse environments
ccr01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ccr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CC_2408
00624 Polycyclic aromatic hydrocarbon degradation
CC_2408
Enzymes [BR:
ccr01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
CC_2408
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AAK24379
UniProt:
Q9A5N9
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Position
2612993..2613700
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AA seq
235 aa
AA seq
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MNPNFKREDAGQPPSLHAPYASTVPRSPRQPLVRIPHTLTETTGPSNAWPRLMGGAMADL
TTQHKAMPQGQRIIVSGRVLDEDGRPVPNTVMEIWQANAAGRYIHKKDQWDAPLDPNFTG
AGRVITDDEGRYQFVSIRPGAYPWGNHHNAWRPAHIHLSLLGPAFATRLVTQMYFPDDPL
IEIDPIANAVPLPYRQRLVSRFDIEATKPNWALGYLFDVVLRGRDQTPFEDDHHA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaacttcaagcgcgaggacgcaggccaaccgccgtcgctgcacgctccctac
gcctcgaccgtcccgcgctcgccgcgccagccgttggtcaggatcccccacaccctgacc
gagacgaccggcccgtccaacgcctggccgcgcctgatgggcggggcgatggcggacctg
accacccagcacaaggccatgccccagggccagcggatcatcgtctcgggtcgcgtcctg
gacgaagacggccgcccagtgcccaacaccgtgatggagatctggcaggccaacgccgcc
gggcgctacatccacaagaaggaccagtgggacgccccgctggaccccaatttcaccggc
gcgggccgagtgatcacggacgacgagggccgctaccagttcgtcagcatccggccgggg
gcctatccgtggggcaaccaccacaacgcctggcgaccggcgcatatccatctgtcgctg
ctgggtccggccttcgccacgcggctggtgacccagatgtatttccccgacgatccgctg
atcgaaatcgatccgatcgccaacgccgtgcccctgccctatcgccaacgcctggtctcc
cggttcgatatcgaggccaccaagcccaactgggcgctgggctatctgttcgatgtggtt
ctgcgcgggcgggatcagacgccgttcgaggacgaccatcatgcatga
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