Colias croceus (clouded yellow): 123700227
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Entry
123700227 CDS
T08651
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03440
Homologous recombination
ccrc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123700227
03460 Fanconi anemia pathway
123700227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccrc03400
]
123700227
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123700227
DNA repair and recombination proteins [BR:
ccrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
123700227
FA (Fanconi anemia) pathway
Downstream FA components
123700227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SNF2-rel_dom
AAA_34
Dendrin
Motif
Other DBs
NCBI-GeneID:
123700227
NCBI-ProteinID:
XP_045503342
EnsemblRapid:
ENSCEUG00000007262
LinkDB
All DBs
Position
19:complement(6511988..6580342)
Genome browser
AA seq
887 aa
AA seq
DB search
MSHGPNASPKKMEMENPFSTEKPTVRNITSNQKYKALLTTQSEPGVDKMIGGVKVNLPVN
PYGSQIALMSMVIKAINKSQNCLLESPTGSGKTLALLCASLAAQKHKRDQVQAKLAQDYF
QDHPELSTLQGNSDLSKCNSPGEDIFSKANNDLSIYSKPSTSEEKLSTFKRLEPCNSPPD
TSTDSPELVSIHKRQRLSSPGSNKQNPGTPVTPEKKLPVSEPTTPQDVRKLYSLVDNLRV
RTSMIVDCSTPTIYYGARTHKQIQQVVKEFSRTVYWKQATMSVLSSREYSCIREFDRKQW
ASKNDMCRGCVKTYEGVRPGSSNCQYYDNRKALNHKTLAPVFDLEDIVMAGEQLKACPYY
AARELANAANIVFCPYNYLIEPSIRESMQINVTDNIIIIDEAHNIEDVCRDAATFTVKRA
QIAAAILELQKMAEYKYQDSMGSIEYLAKILSNWDQWFVNQTPLLNKQPEFGNEVIHVWA
VENFMATLNNHNIGMKQYGEFQLHAEMFVRKLREDPRAMLGATQATGILIETIATFLGYL
FRDMGKFADDFVPALVRSTADEGSNVSWRSSQQNQTADDDLVLRLICMNPAVVFAALKPA
RCIILASGTLTPLVSLHSELGADFPLQVSPSHVIPRERVWIGTLYECPDGSDLDCTSRAS
NRPGTQDALGATLLHVCRVTPAGVLCFLPSYRLMNVLVKRWRETDVWDELNRLKNVFSES
RNVRDHNEIMEDYYHCTTTQKGAVLFAVYRGKVSEGMDFKDHQARAVIIIGVPFPNMHDV
AVKEKIKYNDKYSKSRNLLSGSMWLQVQAYRALNQAVGRCVRHQRDWGAVLLADARFRLP
RHTDHLSKWVRSYMGNNHHTYNSLLNSDNNLESFMKAMTLQDLEDSM
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatggtccgaatgcctcgcctaaaaaaatggagatggagaatccgttctctact
gaaaaaccaacagtgagaaatatcacttctaaccaaaagtacaaagcgttattaactacc
caaagtgaacctggtgttgataaaatgattgggggtgtgaaagttaacttgccagtgaat
ccatatggaagtcaaattgctttaatgtcaatggtaataaaagcaatcaacaaaagtcag
aactgtttgttggaaagtccgactggatcggggaagactttggcgctactgtgtgcatcg
ttggccgcacagaaacataaaagagatcaagtacaggcgaaactcgcgcaagattacttt
caagatcaccctgagttgagcacattgcaaggcaattcggacctatcaaaatgcaacagc
cctggtgaggacatcttctctaaggctaataatgatctcagcatttatagcaaaccgtct
acaagtgaagaaaaactttctacctttaaacgactggaaccttgcaacagtcctccagat
acttcaacagactccccagaactagtcagtatacataagaggcagcggctcagtagtccc
gggagtaataaacagaatcccgggaccccggtcacaccggagaagaagctaccggtctct
gaacctaccacacctcaggatgtacgaaaactgtactcgctagtcgacaacctgcgtgta
aggacatccatgatcgttgattgcagcacacccacaatatactacggggcgcggacacac
aagcaaatacagcaagtggtgaaggagttcagtagaactgtgtactggaagcaagcgacc
atgagcgtgctgtccagtagagagtatagctgtatacgcgagttcgataggaaacagtgg
gcgagcaagaatgacatgtgcagggggtgtgttaagacctacgaaggcgttcgtccaggc
tcaagcaactgccagtactacgacaacagaaaagcactaaatcacaagacattagcccca
gttttcgacttggaagatatagtaatggcgggagaacagttaaaagcctgtccgtattat
gcagcaagagaattggcgaatgcagccaatattgtcttctgtccgtataattatttgatt
gaacctagtattagagaaagtatgcaaataaacgtaacggacaatataataataatcgac
gaagcgcacaacattgaagacgtgtgtcgggacgcggctacgttcaccgtgaaacgggca
cagattgccgctgctattttggagctgcaaaaaatggcagaatacaagtatcaagactca
atgggctccatcgagtatttggcgaagattctctcaaattgggatcagtggttcgtgaac
caaacgcccttactcaataaacagccagagttcggaaatgaggttatccacgtgtgggcg
gtggagaactttatggcgaccttgaataaccataatattggcatgaagcagtatggcgaa
tttcagttgcacgcagaaatgttcgtccgcaaacttcgcgaagacccgcgcgccatgttg
ggcgcaactcaagctacgggcattctcattgaaactatcgccacttttttaggttatcta
tttcgcgatatgggcaagttcgcggatgactttgtcccggcgctcgtgcggtccaccgcg
gacgagggctccaacgtgtcttggaggagttcgcaacaaaatcagaccgcagacgacgat
ctagtgctccgtctaatatgcatgaacccggcggtagtgttcgcggcgctgaagccggcg
cggtgtataatattggcgtcgggcacgctcacaccgctcgtgagcctgcactccgagctg
ggggccgacttcccgctgcaagtgagccccagccacgtgataccgagggaacgggtgtgg
ataggcacgctatacgagtgccccgacggctcagatctggactgcacgagccgcgccagc
aacaggcccggcacacaggatgcactgggggcgacgctgctgcacgtgtgccgcgtcaca
ccggccggcgtgctgtgcttcctgccctcatacaggctcatgaacgtgctcgtcaaacgt
tggcgcgaaactgatgtttgggatgaattgaatagactgaaaaatgtgttcagcgaaagc
cggaatgttcgtgatcacaatgaaatcatggaagactactaccactgcactacaacacaa
aaaggcgcggtattgttcgctgtgtaccgcggcaaagtgtctgaagggatggacttcaag
gatcatcaggctagagctgttattataataggtgtgccattcccgaatatgcatgacgta
gcggtgaaagaaaagatcaaatataatgataagtactcaaaaagcaggaacttactgtca
ggcagcatgtggcttcaagtacaagcgtatagggcgctaaaccaagcagtagggcgctgc
gtgcggcaccagcgcgactggggcgcggtgctgctggcggacgcgcgcttccgcctgccg
cgacacaccgaccacctgtccaagtgggtgcgcagctatatgggtaacaaccaccacaca
tacaacagtctgctaaatagtgataataatttagaatctttcatgaaagccatgacctta
caagatcttgaagattccatgtga
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