Chondromyces crocatus: CMC5_052070
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Entry
CMC5_052070 CDS
T04010
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ccro
Chondromyces crocatus
Brite
KEGG Orthology (KO) [BR:
ccro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccro03009
]
CMC5_052070 (rimO)
Enzymes [BR:
ccro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CMC5_052070 (rimO)
Ribosome biogenesis [BR:
ccro03009
]
Prokaryotic type
ribosomal protein modification factors
CMC5_052070 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AKT41048
UniProt:
A0A0K1EKC6
LinkDB
All DBs
Position
7023185..7024618
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AA seq
477 aa
AA seq
DB search
MTSSHTVHFISLGCPKNRVDSEVMLGVARQAGYEHVGTPEDAEVIVINTCGFIGEAKKES
IDTILEMAQHKDGGRCQRLVVAGCLSQRHPDELAAEIPEVDHFLGSSDMLRLKDILAGGA
ERMLVGNPAQWVVQASDPRALSTPGGSAYVKIAEGCNRTCSFCVIPDMRGKQRSRSEEDI
VREVEQLAAGGVREINLISQDTVAWGRDLPSAGRTSLARLVEKVADVPGIKWVRVFYLYP
ETLGDDLIEVIAHHPRVVRYVDMPLQHAADGMLRRMRRGHGGDRLRRVVSKLRERVADLT
FRTAFIVGHPGETDEEFEELCEFVRWAEFERVGVFKYSPEEGSRSAAMDALVPERKAESR
HRKLMTLQRKIAHRKSTALVGRELEVLVEGSSDEHEYVLMGRHAGQAPDIDGQVYLSGGE
ARPGEMRRVLITQASHYDLVGELLDDDAPSPSPLPAARAKRVSLRVLQTDGRSSQSS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctcgcataccgtccacttcatcagcctcgggtgccccaagaaccgcgtcgac
tcggaggtcatgctcggcgtcgcgcgccaggcgggctacgagcacgtcggtacgcccgag
gacgccgaggtgatcgtcatcaacacctgcgggttcatcggcgaggccaagaaggagtcg
atcgacaccatcctggagatggcccagcacaaggacggcgggcgctgccagcgcctggtg
gtcgcgggctgcctgtcgcagcgccaccccgacgagctggccgccgagatccccgaggtc
gatcacttcctcgggtcgagcgacatgctgcggctgaaagacatcctcgctggcggcgcg
gagcgcatgctggtgggcaacccggcccagtgggtggtgcaggcctcggatccgcgcgcc
ctgtccacgccggggggcagcgcgtacgtgaagatcgccgagggctgcaaccgcacctgc
tccttctgcgtgatccccgacatgcgcggcaagcagcgctcgcgctcggaggaggacatc
gtgcgcgaggtggagcagctcgccgccggcggcgtccgcgagatcaacctgatctcgcag
gacacggtggcctggggccgcgatctcccctcggcgggtcggacgtcgctggcgcggctc
gtcgagaaggtcgccgacgtgcccgggatcaagtgggtgcgggtcttttacctctacccg
gagacgctcggtgacgacctgatcgaggtcatcgcccaccacccgcgcgtggttcgctac
gtggacatgcccttgcagcacgcggccgacggcatgctccggcggatgcggcgtggccac
ggtggtgaccggctccggcgggtggtgtccaagctccgcgagcgcgtggccgacctgacc
ttcaggaccgcgttcatcgtggggcacccgggcgagacggacgaggagttcgaggagctc
tgcgagttcgtgcgctgggcggagttcgagcgcgtcggcgtgttcaagtactcgcccgaa
gaagggagccggagcgccgcgatggacgcgctcgtgcccgagcgcaaggccgagagccgc
caccggaagctgatgacgctgcagcggaagatcgcgcatcggaagagcacggcgctggtc
gggcgtgagctggaggtcctggtggaggggtccagcgacgaacacgagtacgtgctcatg
ggccgccacgcgggacaggcgcccgacatcgacgggcaggtgtacctgtccggcggagag
gcgcgccccggcgagatgcggcgggtgttgatcacccaggcgagccattacgacctcgtg
ggcgagctgctcgacgacgacgcgccctctccctcccctctccccgccgcacgtgcgaag
cgggtgagcttgcgggtgctgcaaaccgacgggcgaagcagccaatcaagttga
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