Corvus cornix (hooded crow): 104684175
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Entry
104684175 CDS
T03546
Symbol
APC
Name
(RefSeq) adenomatous polyposis coli protein isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04310
Wnt signaling pathway
ccw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104684175 (APC)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104684175 (APC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccw01009
]
104684175 (APC)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104684175 (APC)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccw04812
]
104684175 (APC)
Protein phosphatases and associated proteins [BR:
ccw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104684175 (APC)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
104684175 (APC)
Cytoskeleton proteins [BR:
ccw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
104684175 (APC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
EB1_binding
APC_r
APC_u5
APC_rep
APC_u9
APC_u14
APC_u15
APC_N_CC
SAMP
Arm
APC_u13
APC_15aa
Suppressor_APC
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
104684175
NCBI-ProteinID:
XP_010389672
LinkDB
All DBs
Position
Z:complement(67234040..67329752)
Genome browser
AA seq
2847 aa
AA seq
DB search
MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSIEDEAM
ASSGQIDLLERLKELNLESTSFPGVKLRPKVSVRSYGSREGSVSSRSGECSPVPMGSFPR
RGFMNGSRESTGYLEELEKERSLLLAELEKEEKEKDWYYAQLQNLTKRIDSLPLTENFSL
QTDMTRRQLEYEARQIRAAMEEQLGTCQDMEKRAQARVARIQQIEKDILRIRQLLQSQAA
EAERVPQSKHEAGSHDTERQNEGQGAAEISVATSNTGQGSAARMDHETASVMSSGSNYSV
PRRLTSHLGTKVTEDYKPQVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGC
LPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQ
IRAYCETCWEWQEAHEQGMDQDKNPMPAPVDHQICPAVCVLMKLSFDEEHRHAMNELGGL
QAIAELLQVDCEMYGLTSDHYSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQ
LKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSAL
WNLSAHCTGNKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDH
RQILRENSCLQTLLQHLKSHSLTIVSNACGTLWNLSARNAKDQEALWDMGAVSMLKNLIH
SKHKMIAMGSAAALRNLMANRPAKYKDANIMSPGSSLPSLHVRKQKALEAELDAQHLSET
FDNIDNLSPKASHRNKQRHKQNIYSEYVLDGTRHDDGVCRSESFNAGNMTVLSPYVNTTV
LPGSSSSSRGNTENSRSEKDRSVERDRTVALNTYHQAAENTGNSSKRIGMQISTAAAQIA
KVMEEVTSMHIPQEDRSSGSTSELHCLTEDRNAQRRSASAHTHSNTYFPKSENSNRTCPV
PYTKMEYKRASNDSLNSVSSSDGYGKRGQMKPSIESYSEDDESKFCSYGQYPADLAHKIH
SANHMDDNDGELDTPINYSLKYSDEQLNSGRQSPSQNERWARPKHIIDDEMKQNEQRQPR
NQNATYPVYTESGDEKHMKYQTPFGQQECVSSFRSRGSSGSDQNRVGPALGMNQKVNQSL
CQVDDYDDDKPTNYSERYSEEEQHEEEDRPTNYSIKYNEEEHHVDQPIDYSLKYSTEVTA
PSQKPSFTFPKTSSVQLNKTDHIPPSSGSTSAPSAGSKRQNQLHPSSAQSRSGHSQKNAS
CKTPSINQETIQTYCVEDTPICFSRCSSLSSLSSAEDEIGRDQSTRGTDASNTLQIAELK
ENSGTLPTESTASEIASTAQHIRTKSTRLQTSSLSPSDSSRHKAVEFSSGAKSPSKSGAQ
TPKSPPEHYVQETPLMFSRCTSVSSLDSFESRSIASSVQSEPCSGIVSGIISPSDLPDSP
GQTMPPSRSKTPPPAQGVQVKREVPKGKAPTTEKREPGPRQAAVNAAVQRVQVLPDADTL
LHFATESTPDGFSCSSSLSALSLDEPFIQKDAELRIMPPVHENEHGNETEPEQSDDTKDN
QEKKAEKPAEAEKDILDDSDDDIEILEACIISAMPTKSSRKAKKPSQASAPKIPPPVARK
PSQLPVYKLLPSQSRLQSQKHVTFTPGDDMPRVYCVEGTPINFSTATSLSDLTIESPPSE
LANADNVGVGAESGEFEKRDTIPTEGRSTDDSQRAKSSAVTSLGLDDDKTEEGDILAECI
NSAMPKGKSHKPFRVKKIMDQIQQASSSPSNKNQPEGEKKKPTSPVKPVSQNNEYRARVR
KSTEPKSNASNERGYPENRDAKKQNVKNNSRDFHDKLPNNEERVRGGFAFDSPHHYTPIE
GTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKGKEGKETESKDSSNAEQSPNQQPSSRT
QVCQKHPAGRSQTKTFSQSTKDIPDRGAATDEKMQNFAIENTPVCFSRNSSLSSLSDIDQ
ENNNNKEGEPAKRPEAPEPQVESNRPQTSGYAPKSFHVEDTPVCFSRNSSLSSLSIDSED
DLLQECISSAMPKKKKPSRMKSDGEKNNSRNTGGILAEDLTLDLREIQRPDSEHGFSPDS
ENFDWKAIQEGANSIVSSLHQAAAAASLSRQASSDSDSILSLKSGISLGSPFHLTPDQEE
KPFTSNKGPRIIKPGEKSTLECKKVESESRGIKGGKKVYKSMITGKARSNSEVSSLKQPQ
QTSVPSISRGRTMIHIPGVRNSSSSTSPVAKKGPPLKNMNSKSPSEGQSLTSSPRGAKSS
VKPEPAPVTRQPSGLNQSGSSKGPSRSGSRDSTPSRPQQQPLSRPLQSPGRNSISPGRNG
ISPPNKLSQLPRTSSPSTASTKSSSSGRMSYTPPGRQMSQQNLTKQTALPKSTSSIPRSE
SASKGLNQALSTGGSNKKTDLSRMSSTKSSGSESDRSERPALVRQSTFIKEAPSPTLRRK
LEESASFESLSPSRPDSPTRSQLQTPVLSPSLPDMSLSTHSPAQSCGWRKLAPNQSPTIE
YDGRPAKRHDIARSHSESPSRLLINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSAS
SESSEKAKSEDEKQHGGSLSGHKQSKESQAPAKGTWRKIKENEIPQIMNDPPHSSSAATN
GSDSKTLIYQMAPAVSKTEDVWVRIEDCPINNPRSGRSPTGNTPPVIDSVSEKGGMNGKD
PKEIQEKQTPGNGGVSVRTVGLENRLNSFFQIDSPDKKGTETKPLQNNPVPAPEINESTV
SERTPFSSSSSSKHSSPIGAVAARVTPFNYNPSRRKSSVDNSSARPSQIPTPVNNSTKKR
DTKSENTDSSGTQSPKRHSGSYLVTSV
NT seq
8544 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcttcatatgatcaattgttaaagcaagttgaggcattaaagatggagaac
tccaaccttcggcaagagctagaggataactcaaatcacctcacaaaactggaaaccgag
gcgtccaatatgaaggaggtactgaaacagctacaaggaagtattgaagatgaggcaatg
gcatcttctggacaaattgacttactggaacgacttaaagaactgaatttggaaagtacc
agcttccctggagtgaagttaaggccaaaggtgtccgtgcgttcctatgggagccgagaa
gggtctgtgtcgagccgctcgggggagtgcagcccagtccctatggggtcatttccaaga
agaggctttatgaatggaagtagagaaagcactggttacttagaagagctagaaaaagag
agatctctgttgcttgcggagcttgagaaggaagagaaggaaaaggactggtattatgcc
cagcttcagaacctgactaaaaggattgatagtctcccccttactgaaaatttctccttg
caaacagatatgaccagaaggcagctggagtatgaggccaggcaaatcagagctgcaatg
gaagaacaactgggcacttgtcaggacatggaaaagcgggcacaggcaagggtggccaga
attcagcaaatagaaaaggacattcttcgtatacgacagctcctgcaatcacaagcagct
gaagcagagagagtacctcaaagcaagcatgaggcaggttcccatgatacagagaggcag
aatgaaggtcaaggagcagcagaaatcagcgtggcaaccagcaatactggtcagggttct
gctgctcgaatggaccacgagacagccagtgttatgagctctggtagtaactattctgtt
cctcgcagactgacaagtcatctgggtaccaaggtaaccgaagattacaaaccacaggtg
gaaatggtgtattcattgttatcaatgcttggtactcatgataaagatgacatgtcaaga
acattgctagcaatgtctagctcccaggacagctgcatagccatgcgtcagtctggatgt
cttcctctcctcatccagcttttacatggcaacgataaggactctgtgttgttaggaaac
tcccgtggtagtaaagaggcccgtgccagagccagcgcagcactgcacaacatcattcac
tcccagcccgatgataagcgaggcagacgggaaatccgtgtgctccatctcttggagcag
atccgtgcttactgtgaaacgtgttgggaatggcaggaagcacatgaacaaggcatggac
caagacaaaaacccaatgcctgctccagtggatcatcagatttgtcctgcagtgtgtgtt
ttgatgaaactttcatttgatgaagaacacagacatgcaatgaatgagcttggaggtttg
caggccattgctgaactgctgcaagtggattgtgaaatgtatggactcacaagtgatcac
tatagtgttaccctaaggaggtatgctggcatggctctgacaaacctgactttcggagat
gtggcaaacaaggctacattatgttccatgaagggctgcatgagagctcttgtagcccag
ctgaaatctgaaagtgaagacttacagcaggtcattgcaagtgtgttgaggaacttgtcc
tggcgagcagatgtaaacagtaaaaagactctaagagaagttggaagtgtgaaagcattg
atggaatgtgcattagaagttaagaaggaatccaccctgaaaagcgttctgagtgcctta
tggaatttgtcagcacactgcactgggaacaaagctgacatatgtgctgttgatggtgct
cttgcatttctggtcggcacgctgacataccggagccaaacaaacactttagccatcata
gaaagtggaggaggaatactaagaaatgtttctagcctaattgctactaatgaggaccac
aggcaaatcttgcgagagaacagctgcttacaaaccttattacaacacttgaagtcacac
agtttgacaatagttagtaacgcatgtgggaccctgtggaacctctctgctcgaaatgcg
aaggatcaggaggcactgtgggacatgggagccgtgagcatgctgaaaaacctgattcac
tcaaaacacaaaatgatagccatgggtagtgctgccgctctacggaacctcatggcaaac
aggccggcaaagtacaaggatgccaacattatgtctccaggatcaagccttccatctctc
catgtcagaaagcaaaaggcactggaagcagaattagatgctcagcatttatcagagact
tttgacaacattgataacttaagcccaaaagcatctcaccgcaataagcagagacataag
caaaatatatacagtgagtatgtcctggatggcacccgccatgacgatggggtgtgcagg
tcggagagctttaatgctggcaatatgactgtgctctcaccatatgtaaatactacggta
ttgcctggctcctcctcttccagtagaggaaacacagaaaattctcgatctgagaaagac
aggagtgttgaaagggatagaacagtagctttaaatacctatcatcaagctgcagagaat
actgggaactcctctaagagaataggaatgcagatttctactgctgcagctcagattgcc
aaagttatggaagaagtcacaagcatgcacattccacaagaagacagaagttctggttcc
acttctgaactacactgtttgacagaagacagaaacgcccagaggagatctgcctctgcc
catactcactcaaatacatactttcctaagtctgagaactcgaacaggacatgtcctgtg
ccttatacaaaaatggaatacaaaagagcttcaaatgatagtttaaatagtgtcagcagc
agtgacggctatggtaaaagaggccaaatgaaaccttccattgagtcttactctgaggat
gatgaaagtaaattctgtagttacggccaatatccagctgacttggcacacaagattcat
agtgcaaatcacatggatgacaatgatggagaactagacactcctattaattatagtctt
aaatactcagatgagcagttaaattctggaaggcaaagtccctcccagaatgaaagatgg
gcaaggcctaagcatataatagatgatgaaatgaaacaaaatgagcaaagacagccaagg
aaccaaaatgcaacctaccctgtgtacactgaaagtggagatgaaaaacacatgaaatat
cagacaccttttggacagcaggagtgtgtttcttcctttagatcaagaggatccagtggc
tcagatcagaacagagtaggcccagctctcggaatgaatcagaaagtaaaccagtccttg
tgccaggttgatgattatgatgatgataagccaaccaactatagtgaacgttattctgag
gaggaacaacatgaagaggaagacagaccaactaattacagcataaagtacaatgaagag
gaacatcatgtcgatcagcctattgattatagtttaaaatattcgacagaagttacagca
ccttctcagaagccatctttcacttttccaaagacttcttcagtgcagctcaataaaact
gaccatattcccccaagcagtgggagcacatcagccccctcagctggatcaaagaggcag
aaccagcttcacccgagctctgcacaaagtagaagtggccattcacagaagaatgcctcc
tgtaagactccctctattaatcaggaaactatacaaacttactgcgtggaagatacccca
atatgtttttcaaggtgcagctctttgtcatccttgtcatcagctgaagatgaaatagga
cgtgatcaatccacacgtggcacagatgccagtaatacactgcagattgcagaactgaag
gaaaacagtgggactctgcctacagaaagtacagcaagtgaaattgcatcaacagcacaa
cacatcagaacaaaatccactagacttcagacttctagcttgtctccttctgactcctct
agacataaagctgttgaattttcttcaggtgccaaatctccctcaaagagtggtgcccaa
actcctaagagtccaccagaacattatgtacaggaaaccccactcatgtttagcagatgt
acttctgtaagttccctggatagttttgaaagccgttcaattgctagttcagttcaaagt
gagccttgcagtggaatagtaagtggtattataagtcccagtgaccttccagacagccct
ggacaaacaatgcctccaagcagaagtaaaacacccccacctgctcaaggagttcaagta
aaaagagaggtacctaaaggaaaagcacctactactgagaagagagagcctggtcctaga
caggcagctgtaaatgcagctgttcaaagagttcaggtactgccagatgctgatacacta
ctacattttgccacagaaagcacaccggatgggttttcttgctcttctagcctgagtgct
ctgagccttgatgagccatttatacagaaagatgcggagttaagaattatgcctccagtt
catgaaaacgagcatggaaatgaaacagaacctgaacagtcagatgatacaaaggataac
caggagaagaaagcagagaagccagctgaagcagaaaaagacattctggatgattctgat
gatgatattgaaatactggaagcgtgtattatttctgcaatgccaacaaagtcttcacgt
aaagccaaaaagccttctcaagcatctgctccaaaaatacctcctcctgtagccagaaag
cccagccagttgccagtttacaaacttttgccttcacaaagcagactgcaatcacaaaag
catgtgacttttactccaggagatgatatgccacgagtatattgtgttgagggtacacca
ataaatttttcaacagctacatctctgagtgacctgaccatagaatccccaccaagtgag
ttggccaatgcagacaatgtgggtgtgggagcagagtcgggggagtttgaaaagcgggac
accattcctacagagggcagaagtactgacgattctcagagagcaaaaagctcagctgtg
acttccctgggcctggatgatgacaaaacagaagagggtgatattttggctgagtgcatt
aactcagctatgccaaaaggaaaaagtcacaaacctttcagagtgaagaagataatggat
caaattcaacaagcatcttcatctccaagtaacaaaaaccaaccagaaggtgagaaaaag
aagccaacatcaccggtaaagcctgtttcccaaaacaatgagtacagagcacgtgtgcga
aaaagcacagagcctaaaagcaatgctagtaatgaaagaggctatccagagaacagagat
gcaaagaaacagaacgttaaaaataattcaagagattttcatgacaaattgccaaataat
gaagagcgtgtaagaggaggctttgcatttgattcccctcatcattacacacctattgag
ggaactccttattgtttttcacggaatgattccctgagttctttagattttgatgatgat
gatgttgacctttcaagggagaaggcagaattaagaaaaggaaaagaaggcaaggaaacg
gaaagtaaagacagctctaatgccgaacagtctccaaatcagcagccaagtagcaggaca
caagtctgtcaaaaacacccagcgggcagaagccagacaaaaactttctctcagtcaact
aaagatattccagacagaggagcagctacagatgagaaaatgcagaattttgctattgaa
aacacacctgtttgtttttctcgcaattcgtctcttagctccctcagtgatattgatcaa
gaaaacaataacaacaaagaaggggaacctgcaaaacgtccagaggctcctgagccacag
gtggaatccaacagaccacagacttctggttatgcacctaaatcatttcatgttgaagat
actcctgtatgcttctctagaaacagctctctgagttctcttagcattgactcagaagat
gaccttctgcaggaatgcattagttctgctatgcctaaaaagaaaaagccctcaagaatg
aagagtgatggtgaaaaaaataattccagaaatacaggtggtatactagcagaagattta
acactggatttgagagagatacagagaccagattcagaacatggtttttcacctgattca
gagaacttcgattggaaagctatacaagaaggtgcaaattctatagttagtagcttgcat
caagctgcagctgctgcatcactgtctagacaagcttcatcagactctgactctatcctt
tcattaaaatctggtatttctctagggtcaccatttcatctaaccccagaccaagaagaa
aaacctttcactagtaataaaggtccaagaattattaagccaggagagaagagtacattg
gagtgtaaaaaagtagaatcagaaagtaggggaatcaaaggagggaagaaagtgtataaa
agtatgatcacaggaaaagctcgctccaattcagaagtctcaagtttgaagcaaccacaa
cagacaagtgtgccttcaatttcacgtggtagaacaatgatccatattccaggagttcga
aatagttcttcaagtactagtcctgttgccaaaaaaggacccccactcaaaaacatgaac
tccaagagtcccagtgaaggccaaagtttgactagttctccaagaggagccaaatcatcg
gtgaaacctgagccagctcctgtgactaggcagccatcagggttgaaccagagtggatca
agtaaagggccttctcgatcaggatctagagactccacgccttctagacctcagcagcag
ccattaagtaggcctctgcaatctcctggacgaaactcaatttccccaggaagaaatggt
atcagtcctcccaacaaactgtcacagttgccaagaacatcatctcctagtacagcttca
actaaatcctcaagttcaggcagaatgtcatacacaccaccaggcaggcagatgagccag
caaaaccttacaaagcaaactgccttacctaagagtaccagtagcattccacgaagtgag
tctgcttcaaaggggttaaaccaagctctcagcactggtggatcaaacaaaaagactgac
ctatccagaatgtcatccacaaagtctagtggaagtgaatctgacagatctgagagacct
gctcttgttcgtcagtcaacttttattaaagaagctccaagcccaactctgagacggaaa
ttagaagagtcagcttcatttgaatctctgtcaccttccaggccagactctcccacaagg
tcccaactacagaccccagttttaagtccatctcttcctgatatgtcgttatccactcat
tcacctgcccagagttgtggttggcgaaaattagcccctaatcagagccctactatagaa
tatgatggaagaccagcaaagcgtcatgacatagctcgttcccattctgagagtccctct
aggttgctgatcaatagatcaggaacatggaagcgtgaacacagtaagcattcctcatca
cttcctcgtgtaagcacttggcgaagaactggaagttcctcctcaatcctgtcagcttct
tcagaatccagtgaaaaggcaaaaagtgaagatgaaaagcagcatggaggttctctttct
ggacacaagcaaagtaaagaaagccaagcaccagcaaaaggtacttggagaaaaataaaa
gaaaatgaaattcctcagataatgaatgatcctccgcattcttcttcggctgccacaaat
ggctctgattccaaaaccctcatctatcagatggctccagctgtctctaagacagaggat
gtgtgggtgaggatagaggactgcccaattaacaaccctcgatctggaaggtccccaact
ggaaatactccccctgttattgacagtgtttcagagaaaggcggtatgaatggtaaagat
cctaaagagattcaagaaaagcaaaccccagggaatggaggtgtttctgttcgtactgtt
ggcttagaaaaccgtctgaactctttctttcagatagacagtccagacaagaaaggcacc
gaaacaaagcctctgcagaataatcctgttcctgcaccagaaattaacgaaagtactgta
agtgagcgtactccattcagttctagcagctcaagcaagcacagctcccccatcggtgct
gtggcagcaagggtcactcctttcaactacaacccgagccgcaggaagagcagcgtggac
aatagttctgctcggccatcacagattccaacaccggtgaataacagcaccaagaaacgc
gacactaagtctgaaaacactgactccagtggaacacaaagccctaaacgtcactctggc
tcttacctggtaacttctgtttaa
DBGET
integrated database retrieval system
