Corvus cornix (hooded crow): 104686781
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Entry
104686781 CDS
T03546
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
ccw03420
Nucleotide excision repair
ccw04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104686781 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
104686781 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104686781 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccw01001
]
104686781 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104686781 (CDK7)
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104686781 (CDK7)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104686781 (CDK7)
Enzymes [BR:
ccw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
104686781 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
104686781 (CDK7)
Protein kinases [BR:
ccw01001
]
Serine/threonine kinases: CMGC group
CDK family
104686781 (CDK7)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104686781 (CDK7)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
104686781 (CDK7)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104686781 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
FTA2
Haspin_kinase
RIO1
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
104686781
NCBI-ProteinID:
XP_039422823
LinkDB
All DBs
Position
Z:complement(1683181..1703213)
Genome browser
AA seq
343 aa
AA seq
DB search
MDARARAKRYEKLDFLGEGQFATVYKAKDKTNSRIVAIKKIKLGHRSEAKDGINRTALRE
IKLLQELSHPNIIGLIDAFGHKSNISLVFDFMETDLEVIIKDTSIVLTQSHIKAYMLMTL
QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPE
LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPGMTS
LPDYVTFKPFPGMPLQHIFSAAGDDLLNLLQGLFTFNPNTRVTATQALKQKYFSNRPGPT
PGNQLPRPNCPAEAAKEQQNALLNLKRKRIEGIDQGLPKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcgggcccgcgccaagcgctacgagaagctcgacttcctcggggaggggcag
ttcgccaccgtctataaagccaaggacaagacgaatagccgaatcgtggctattaagaag
attaaactggggcatagatcagaagctaaagatggaatcaacaggacagccctcagggag
ataaaactgttacaggagctaagccatccaaatattattggtcttattgatgcatttgga
cacaagtccaacattagtttggtgtttgattttatggaaacagatctagaggttattata
aaggatacgagtattgtgttgacacagtctcacatcaaggcatatatgctgatgacactt
caaggattagaatatttgcatcagcattggattctacacagggatcttaaaccaaataac
ttgttgctagatgaaaatggagttttaaaattggctgactttggcttggcaaaatctttt
ggaagcccaaatagagtttatacacaccaggtagtaacaaggtggtaccgagccccagaa
ctattgtttggggctagaatgtatggtgttggtgttgatatgtgggctgttggttgtatt
ttagctgaattgctcctcagagttccttttttgcctggagactctgatcttgaccagctg
acaaggatatttgaaacactgggcactcctacagaagaacagtggcctgggatgacaagt
cttccagattatgtcacatttaagcctttccctggaatgccacttcaacatatcttcagt
gcagctggtgatgatctgctcaatcttcttcaaggcttattcacttttaatcctaacact
agagttacagctactcaggcattgaaacagaagtattttagtaaccgaccaggacctact
ccaggaaatcagctgccaagacccaactgtcctgcagaagctgcaaaggagcaacaaaat
gcacttttaaatttaaaaaggaaaagaatagaaggaatagatcaaggattaccaaaaaaa
ctgattttttga
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