Corvus cornix (hooded crow): 104686823
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Entry
104686823 CDS
T03546
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00531
Glycosaminoglycan degradation
ccw01100
Metabolic pathways
ccw04142
Lysosome
Module
ccw_M00076
Dermatan sulfate degradation
ccw_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
104686823 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104686823 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
ccw02042
]
104686823 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
ccw00536
]
104686823 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccw00537
]
104686823 (SPAM1)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
104686823 (SPAM1)
Bacterial toxins [BR:
ccw02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
104686823 (SPAM1)
Glycosaminoglycan binding proteins [BR:
ccw00536
]
Heparan sulfate / Heparin
Enzymes
104686823 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccw00537
]
Enzymes
104686823 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
104686823
NCBI-ProteinID:
XP_019139071
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All DBs
Position
1A:complement(21104157..21120100)
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AA seq
572 aa
AA seq
DB search
METVRQMQSFGICVTCMYPVASGVVFATLLVSCCSSLNIRAPPLVSNSPFLSIWNAPTEL
CTEKFGVQLDMNIFSLIGSTLKTSIGQNITLFYADRLGYYPYINEVTGETVNGGLPQLSV
LENHLKKAKEDIQFYIPSDEQLGLAVIDWEHWRPLWIRNWGSKDIYRQESIELVLQRDLS
LSEAEARTIAKMEFESAAKSFMLETLKLGIEMKPNRLWGYYLFPDCYNYDYKQKPHNYTG
TCLDIEIERNNELNWLWEKSTALYPSIYLETALKSSRNAQLFVRNRVQEAIRTSYVSNAS
NPLPVFVYTRPVFTDVHEEYLSEDDLVNTIGESAALGASGIVIWGDMNLTQNKNTCRTLD
NYLRRTLTPYLINVTMAARICSQVLCQDSGACARKKRNSSDYLHLNPENIAIQMTKDGKY
TLQGQPSYQDLQTFVEKFDCHCYAGHSCEPRADINDIHYLHVCISEDICIQISTNSLSYI
EAYAEKILPNRSAFSFTSESKVTISTHPEIEDFQSTSGNNILNITTAECNTVTAASSYDL
KENDTRTSSSSSSYKIRMFDLFHLILLLRTLI
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgtaagacaaatgcaaagttttggcatctgtgttacctgtatgtatcctgta
gcatccggtgtggtgtttgccactcttctagtttcttgctgctcatctctgaacataaga
gctcctccacttgtttctaattcacctttcctttctatctggaatgctcctacagaactt
tgtactgaaaagtttggagtgcagctggacatgaatattttttctctaattggaagtaca
ctaaagacatccattgggcaaaacatcactctcttctatgcagacaggcttggctactac
ccttacataaatgaagtcacaggagagacagtcaatggaggactccctcaactctcggtg
ctggagaatcacttaaaaaaagccaaagaggacatccagttctacattccttcagacgaa
cagcttggattggctgtcattgactgggaacactggagacctctgtggataaggaactgg
ggatcaaaagatatttatagacaggaatccattgagctagttctgcagagagacctcagt
ctatcagaagccgaagccagaactatagctaaaatggaatttgaatctgcagcaaaatca
tttatgttggaaactttgaagctgggcatagaaatgaaaccaaatcgtctgtggggatat
tacctttttccagactgttataactatgattacaaacaaaagccacacaattatacagga
acctgtttagatattgaaatagaaagaaataatgagcttaactggttgtgggagaaaagc
acagcactttatccatctatctatctagagacagccttaaaatcttccagaaatgctcaa
ctctttgttcgcaacagagttcaagaagccattagaacttcctatgtctcgaacgctagt
aatccccttccagtttttgtatatacacgtccagtattcacagatgtccatgaggaatat
ctctctgaggatgacttggtaaataccattggagaatctgctgcactgggtgcttctgga
attgtgatctggggtgatatgaatttaacacaaaataagaacacctgtagaactctggac
aactaccttagaaggactttgaccccatacctcatcaacgtcacaatggcagccagaata
tgtagccaagtgctatgccaagactctggtgcttgtgcacggaaaaaacggaattccagt
gactatcttcacttgaaccctgagaatattgcaattcaaatgacaaaggatggaaaatac
actttacaagggcaaccatcatatcaggatctgcaaacatttgtagaaaaatttgattgc
cattgttatgcagggcacagctgtgaacctagagctgatataaatgacatccattacctc
catgtttgcatttcagaagatatttgcattcagatatccacaaattcactttcttatata
gaagcctatgcagaaaagatcctgcctaacagatctgcattttcatttacctctgagagt
aaggtgacaatatctacacatcctgaaatagaagatttccaatctacctctggaaataat
atacttaatataacaactgcagaatgtaacactgttacagctgccagtagctatgattta
aaagaaaatgatactcgtacttccagtagttcttcatcttataagataaggatgtttgat
ctgtttcacttaattctgcttttgagaaccttaatatga
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