Corvus cornix (hooded crow): 104691045
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Entry
104691045 CDS
T03546
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104691045 (SLC6A4)
Transporters [BR:
ccw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104691045 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
104691045
NCBI-ProteinID:
XP_010400710
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Position
19:complement(7268041..7289216)
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AA seq
668 aa
AA seq
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MEKKATRNETEPLTSKKDFSDCSKGDDCKENGLVVRNPKSALRLVEDGNKVHSSQGDKGE
AAQISNGYSGVQSSVPCNGEMEDAQGMAPAATTTTTTTTSTTCGAEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSCTN
PWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSDGLDDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKLLA
TEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTV
LGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWGKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPAVL
TVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSNPPE
LRLFDYDYPYWTTVVGYCIGTSSIIFIPIYMVYRLVITPGTLKERILKSITPETATEIPF
GDIRMNTV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggccacaaggaatgagacagagcccctgacttccaagaaagatttctca
gactgtagcaaaggagatgattgtaaagagaacggacttgtggtcaggaaccctaaatct
gccctacggctggtggaggatggcaacaaagtccactccagccagggggataagggggag
gcagctcagatctcaaatggttattcaggggttcagagctccgttccctgcaatggagag
atggaggatgcccagggcatggccccagcagccaccaccaccaccacaaccaccacatcc
accacctgcggggccgaagctcagcagcagctgatggagctggaggacagagagacctgg
agtaaaaaaattgactttcttctctctgtcattggatatgcagtggatctgggaaatgtg
tggagatttccttatatctgttatcaaaatggaggaggagcattcctcattccttacaca
atcatggccatctttggagggattcctctcttctatatggaattagcactaggacagtac
cacaggaatgggtgtatttccatttggagaaaaatatgtcctatattcaaaggaattggc
tttgccatctgtatcatagatctttacgtagcctcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacggcggagctgccctggaccagctgcacaaat
ccctggaacacaggaaactgcaccaactacttcagcaaggacaacgtcagctggtccctg
cactccatctctcctgcagaagaattttatacccgccaggttctgcaggtgcacaggtct
gatggactggatgacctggggggcattagctggcaactgaccctctgcttgctgttaatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacatcaggcaaggtggtttgg
gtgactgccacgttcccttacatcatcctcttcatcctgctagtgagaggtgcaactttg
cctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactcctggcc
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggttttggg
gtcctgttggcttatgccagctacaacaaattccacaacaactgctaccaagatgctttg
gtcaccagcactgtgaactgcttgaccagctttgtgtctggatttgtgatcttcaccgtg
ctgggatacatggctgagatgaggaacgaggatgtgtcagaggttgccaaagacactgga
cccagcctgctcttcatcacgtatgcagaggccattgcaaacatgcctgcttccaccttc
tttgccatcatcttcttcctgatgctgctcacactggggttagacagcacgtttgcagga
ctagagggagtgattactggagtcctggatgaattcccgcatgtctggggcaaacgcagg
gaattgtttgtccttggtctgaccatcgtttgctttttggggtcactggcaaccctgaca
tttggaggagcgtatgtggtgaagctgtttgaagaatacgccactggtccagctgtcctg
accgtcgtgttcctggaggcagtggctgtgtcctggttctatggcatcacccagttttgc
aatgatgtgaaagaaatgctgggctctgccccaggctggtactggcgagtttgctgggtt
gcaattagtcccctcttccttctgttcgtcacgtgcagctttctgtccaaccctcctgag
ctgaggctttttgattatgattatccctactggaccacagtcgtgggttactgcatagga
acctcctccatcatcttcattcccatctacatggtctatcggttggtcatcaccccaggg
acacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaattcccttt
ggagacatccgcatgaacacagtataa
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