Corvus cornix (hooded crow): 104691743
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Entry
104691743 CDS
T03546
Symbol
TRMT2B
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (uracil(54)-C(5))-methyltransferase homolog
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104691743 (TRMT2B)
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
104691743 (TRMT2B)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104691743 (TRMT2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_4
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
104691743
NCBI-ProteinID:
XP_039428178
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All DBs
Position
4A:16550158..16561886
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AA seq
479 aa
AA seq
DB search
MGVAMRRGTHTRGVAKHGEHRSGHAAGLNCVALPCGREDLRSCSCSGPTGTRSGTGTGTG
QGACQALQLLGRCFRVAGGRPRRSRCSRRFPETPSQLNRGFFPFIFGFASLLTASLAAEQ
SRSLRGSTLASQLWGNEPASHAHTFIPLIPPKRERNIVCVKANHVENILSKHKQVAQCYE
EFICRSPLDSCILFHEGGHWRELVVRTTSCGHTMAIITFHPQELGQEALATQKALLKEFF
MCGPGAVCALTSLYFQESTMTRCSHEQXPFQLLHGAPHIFEELLGLKFRISPDAFFQVNA
AGAEVLYQAVGELCQATGDTILLDICWGTGTIALSLAHXVSKVIGVEVVEKAIEDAEWNA
AFNGEISNCEFHSGKAEAVLPQLLGSWEDAQTLVAVVNPSQAGLHDRVVRAIQNCRSIRR
LLYISCKPEGEAMRNFLELCCPPDPRKKLAGEPFTPVLAVPFDMFPHTVHCELVLLFTR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggccatgcgacgcgggacccacacacggggcgtggccaaacacggcgagcac
cgctccgggcacgcagctggcctaaactgtgttgcgctcccttgcggacgggaggacctg
cgctcctgctcctgctccggccccaccgggacgaggagcgggaccgggaccgggaccggg
cagggagcgtgccaggctctgcagctgttggggcgctgcttccgggttgcggggggccgg
ccccgccgctcccggtgctcccgtcgcttccctgaaaccccgtcccagttaaaccggggc
ttctttccttttatctttggcttcgcctctttactgactgcttccctcgcggcagagcag
agccgcagcctcagaggctccacactcgcttcgcagctctggggtaacgagcccgcgtct
catgcacacactttcatcccccttatccccccaaaaagagaaagaaatattgtctgtgtg
aaagccaaccatgtggagaacatactctcaaaacataaacaagtagcccagtgctatgag
gagttcatctgtcgctcccccctggactcctgcatcctcttccatgaaggaggacactgg
cgggagctcgtggttcgcaccaccagctgtggccacaccatggccatcatcaccttccac
ccccaggagctgggccaggaggcactggctactcagaaagcattgctgaaggagttcttc
atgtgtgggcctggagcagtctgtgccttgacttcactttatttccaagagagcaccatg
acacgctgctcccacgagcagntccccttccagctcctccatggagcaccgcacatcttt
gaagaactgcttggcctgaagttccgcatctctccagatgcctttttccaggtcaacgcg
gctggagcagaagttctgtaccaggcagtcggggagctctgccaggctactggggacacc
atcctccttgacatctgctggggaacaggtacaattgctctctctctggctcactgagtg
tccaaggttattggtgttgaggtggtggagaaggcaatagaggatgctgagtggaatgca
gcattcaatggtgagatctcaaactgcgagtttcacagtggaaaggcagaggctgtgttg
ccacaactcctgggatcgtgggaggatgcccaaacgcttgttgctgtggtgaacccctct
caggctggcctacatgacagggttgtacgagccatccagaactgcaggtccatccgcagg
ctgctctacatctcctgcaagccagagggcgaagccatgaggaacttcctcgagctgtgc
tgcccacctgacccacggaagaagctggcaggggaaccatttacccccgtgttggctgtt
ccttttgacatgtttcctcacactgtgcattgtgagctggtgctgctgttcacccgctga
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