Corvus cornix (hooded crow): 104696654
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Entry
104696654 CDS
T03546
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104696654 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104696654 (POLR1B)
Enzymes [BR:
ccw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104696654 (POLR1B)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104696654 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
104696654
NCBI-ProteinID:
XP_019148391
LinkDB
All DBs
Position
3:186101..200188
Genome browser
AA seq
1010 aa
AA seq
DB search
MPQGTIKHPLGHIPIMVKSKLCNLYGFSPQDLMQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFHKEL
FFLPLGFALKALVNFPDYQIFEELVKGREDDTFYVNCVTEMMRTVVDAGCLTQQNVLEYL
GKSFRVKLNLPEWYSNEQAADFILSNCICIHLTNRTEKFYQLCMMTQKLYAFAKGECMED
NPDSLMNHEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKADISLNTDSLVKAFSLAP
DFTKPFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVTDIPPLLCSLGVTPVDA
APSQPYSECYRVVLDGSMVGWVERELAPEIAQTLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTNPCRMVRPVRNLSYGRNEWIGTLEQIFMNVATLESEVVPGVTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKVESIDLSLK
ASRAGDNLVFGIRPSDPNVGEKLDADGLPFVGSILQPGDPFYSFMNLSTGETFTVYYPSK
EVGIVDNVRVCSNDRGTGKFKKVCITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGE
TLVSAGYNFFGTEKMYSGISGVELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PVKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMMSPVLEKL
SQSSMTSSRRYSCSICSEVDAIEVVPVPHVFRYFVAELAAMNIKTKLSVE
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggactatcaaacatcccctagggcatattccaatcatggtgaagtccaaa
ttgtgcaacctctatggtttttctccacaagaccttatgcagcatcatgaggaggaagag
gaaatgggaggctactttataatcaatggcttagaaaaagtaatcaggatgctgattatg
cccaggcgaaactttcctcttgcgatgacaagacacaagtggaaaaacagaggccctggt
ttcacagagtatggggtggtgatgcactgtgtcaaggatgagcacactgcaataaatatg
aaccttcactacttggaaaatggctgtgtcatggtgaatttcatttttcacaaagaattg
ttcttcctccccttgggatttgctctgaaggcattagttaatttcccagactaccagatt
tttgaagagttggtaaaaggaagggaagatgacaccttttatgtgaactgtgttactgag
atgatgagaacggtggtggatgccggctgcttgacacagcaaaacgtcctggagtacctg
ggaaagagcttccgagtgaaactcaacctgcctgagtggtacagcaacgaacaggctgca
gatttcattctgagcaattgtatctgcattcacctgaccaatagaactgaaaagttctac
cagctctgtatgatgacccagaagctctatgcttttgccaaaggggagtgcatggaggat
aacccagacagtctcatgaatcacgaggtgctcaccccaggacagcttttccttatgttc
ttaaaggagaggcttgaaacctggctgcaatctgttaggtttgtgttggagaaaagagca
gaaaaggcagatatcagcctaaatacagacagcctggtgaaggcattcagcctggcccca
gacttcaccaagccatttgagtatctgcttgcaaccggtaacctgcggtctaaaacaggg
ctgggcatgttgcaggacagtggtctctgtgtggtgggggacaagctgaatttcatccgc
tacctctcccacttccgctgcatacacagaggggcagcgttttcccagatgagaaccacg
actgtccgcaagctgctgcccgaatcctggggcttcctgtgccctgtggacacgccggac
ggagagccctgcgggctgatgaaccacatgacagctctgtgtgaaatcgtgacagagatg
gtgcccgtgacagacattccacccttgttatgttccctgggtgtcacccccgttgatgca
gctccaagccagccttactcagagtgctacagagttgtgttggatggctccatggtgggc
tgggtagagcgggagttggctcccgagattgcgcaaaccctccgccgtttcaagataaca
caagagaagagattccctgcacgggcagaagtggtccttatcccaatgacaggaaaaccc
agcctgtatccggggttgttcattttcactaacccttgccggatggtgcggcctgtcaga
aacctgtcctatggaaggaatgaatggattgggactctggaacagatcttcatgaacgtg
gccacgctggagtcagaggtggtgcctggagtgaccactcaccaggaactcttccctcac
agcattttgagcgtggtggccaatctcattcccttctccgaccacaaccaaagcccacgg
aacatgtaccagtgccagatgggaaagcagaccatggggtttccagtttacaactacaag
gatcgctcagataacaagctgtaccacctgcacaccccccagagccctctggtgaggccc
agcatgtatgactattatgggatggacagctatcctgtcggcaccaactccatcgtggct
gtcatctcctacagtggctatgacatggaagatgcaatgattgtaaataaatcttcctgg
cagagagggtttgcttatggaagtgttatcaaggtggagagcattgacctttcccttaaa
gccagcagggcaggcgataatttagtatttggcatcaggcctagtgatccaaacgttggg
gagaagctggatgctgatggactgccttttgttgggtctatcctgcagcctggggacccc
ttctacagcttcatgaacctcagcacaggggagaccttcactgtgtactatccgagtaag
gaagtgggcattgtggacaacgttagagtgtgcagcaacgaccgtggcaccgggaagttc
aagaaggtttgcatcactgtgagggtgccccgaaatcccactgttggagacaaatttgcc
agccgtcacggacagaaaggtatcctgagccagctctggcctgtcgaggacatgcccttc
acagagaacgggatggttccagacatcctcttcaacccgcacggctttccctcccgtatg
accattgggatgttaatcgagagcatggcagggaagtcggcagccctgcacggggtctcc
tatgatgccactcccttcaccttcacagagaagaagtctgctctgaaatacttcggtgag
actttagtgagcgcaggctacaacttctttgggacggagaagatgtacagcggcatcagc
ggggtggagctggaggcagagatctttgtgggggtggtgtactaccagcgcctgcgccac
atggtctccgacaagttccaggtgaggaccacggggccccgagatgctgtcaccaaccag
cctgtcaaggggaggaatgtggaaggtgggatccgctttggcgagatggagcgggatgct
ctgctggcccacggcacatccttcctgctgcaggaccgcctgttcaactgctccgatggc
tctgtagcctacgtgtgcacaagctgcggcagcatgatgtcccctgtgctggagaaactg
tcccaatcctccatgaccagcagcaggagatactcctgctccatctgcagtgaggtggat
gccattgaggttgtccctgtgccccatgtcttccgctactttgtggctgagctggcagcc
atgaacataaaaacaaagctcagcgtggagtag
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