Corvus cornix (hooded crow): 104696775
Help
Entry
104696775 CDS
T03546
Symbol
HLCS
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00780
Biotin metabolism
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
104696775 (HLCS)
Enzymes [BR:
ccw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
104696775 (HLCS)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
104696775 (HLCS)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
104696775 (HLCS)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
104696775 (HLCS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
ABC_transp_aux
FlpD
Motif
Other DBs
NCBI-GeneID:
104696775
NCBI-ProteinID:
XP_039409446
LinkDB
All DBs
Position
1:115861059..115965245
Genome browser
AA seq
864 aa
AA seq
DB search
MLITLCYLYLWARWGPRSAALVRSTVRRLHRSRCSFTFCARQPHPEERVCLRVGGKVFCT
GEAQFLDDLNRWSVLLISPFIYPEKLLTAEHIAFVTESISAQTENVQKGPDSSKEIVKWS
DFCSPLAYKPGEPFKLIAEASVDNFSSLGIAFLEDRLQMDNGMVPHRIVSVYLQESALKE
LAQEAPSVKEQSADMDAVTPAGKSGLGRGEEEKSKLEEGREHEDEVTSPCDKEPGAGEHH
HLHLSSCHECLQLENSTIESVKFASAENIPELPDDCSSKLEEKEDECLEKGIKRVNLAGK
PPNILIYLGSETAKERFEQVKSVLRECIDAESYTIYQLQQEQVLKDPWIENSLLLVIATE
EPIPEGSHKQFMKFLSKGGKILGFSSSFTFGGVQIKRKNKLRKAVHELVVSKKDSPEVKL
NLLVSGCVFEQGMKEDASRVKTLSRLNNADKDTVIVHLTYGSSGGEAVLSQAHLELDSNS
MDVQTEEDFNLLKMSNSKRYEVLKEILTSLGLRCELSEIPALAPIFLLSPDEEIHLAFLK
WLEGNVDAEGLRASSKVSLKFVSSCESKVEVTPSLMPVVTEMGSFSSEHFSLKTYQEHLQ
TKKLGKILLFTEVTTTTMDLLDGLMFELPEEMGLIAVAVRQTQGKGRGGNVWLSPVGCAL
STLHISIPLHSNLGQRIPFIQHLVSLAVVEAVRSIPGYEDIELRVKWPNDIYYSDLMKLG
GVLVNSTLVETTFHILIGFGFNVNNSNPTICINDLIAKFNKEEGTELKPLSADCLIARTV
TVLERLIEIFQEKGPNGVLPQYYKYWIHSGKQVRLRGEEGPLAWIVGIDDYGYLQVHEEG
KGVESVHPDGNSFDMLRNLIVPKH
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcacgctgtgctatctgtacctgtgggcgcgctgggggccgcgctcggccgcg
ctcgtccgcagcaccgtgcggaggctgcaccgctcccgctgctccttcaccttctgcgcc
cgccagccgcaccccgaggagcgcgtctgcctccgcgtcggcggaaaggtgttctgcacc
ggcgaggcgcagttccttgatgacttaaacaggtggagtgtgcttctcatttctcctttt
atttaccctgagaagttgctcacagcagaacacatagcttttgtgacagaaagcatttct
gctcagacagagaacgtgcagaaaggacctgattcttcgaaggagattgtgaagtggtca
gacttttgttcacccttggcctataaacctggtgaaccttttaagttaattgctgaagca
agtgtagataatttcagtagccttggaatagccttcctggaagacaggctgcagatggat
aacgggatggtgccacacaggattgtttctgtctatttacaggaatctgctctgaaggag
ttggcccaggaggcaccatccgtgaaagagcaaagtgcagacatggatgcagtaactcct
gctgggaaatcaggattaggacgaggtgaggaggagaaatccaagctggaggaaggaagg
gagcatgaggatgaagtcaccagcccgtgtgacaaggagccaggagctggggaacatcac
cacttgcacctttccagctgccacgagtgtctgcagcttgaaaacagcaccatcgaatcc
gtgaaattcgcctctgcagaaaacattccagagcttcctgatgattgcagcagcaaactg
gaggagaaggaggatgaatgtctggaaaaaggaataaagagggtaaaccttgctggaaaa
ccccctaatatattgatctacctgggctctgagactgccaaagagaggtttgagcaggtg
aaatcagtcctcagggaatgcatcgatgctgagagctacaccatctaccagctgcagcag
gagcaagtgctcaaagatccctggattgagaactccctgctgctggtcattgccacagag
gagcccattcctgaggggagccacaagcaatttatgaaatttttgtctaaaggggggaag
attcttgggttttcttcgtccttcacctttgggggcgtgcagataaagcgcaaaaacaaa
ctgaggaaggctgtgcatgagctggtggtctctaaaaaggacagccctgaggtgaagttg
aacctgctggtcagtggctgtgtttttgagcaagggatgaaggaagatgccagcagagtg
aagacattgagtcggttaaacaatgctgataaagacacagttattgtgcatctgacttac
gggagcagtggaggagaagccgtcctttcccaggcccacttggaactggacagcaattcc
atggatgtgcaaactgaagaggattttaatttgctcaagatgagcaattccaagagatac
gaagttctcaaggagatcctgacatcccttgggctgagatgtgaactgagtgaaattcct
gcgttagcacccattttcctgctctctccagatgaggaaatccatcttgctttcctgaaa
tggctggagggaaacgtggatgctgagggattaagggcatccagcaaggtgtctctgaaa
tttgtttcgtcctgtgagtccaaagtggaagtgactccgtccctgatgccagtggtcacg
gagatgggaagtttctcctcagaacatttcagcctgaagacctatcaggagcatctccaa
accaagaagctgggaaagatccttcttttcactgaggtgaccacgacaaccatggatctt
ctggatgggttaatgttcgagttgcctgaggagatgggtttaatagcagtggctgttcga
caaacacaagggaaaggtcgtggtggaaatgtttggctcagtcccgtgggctgtgccctg
tccactctgcacatctccatccctctacattccaacctaggccagagaattccttttatc
caacacctggtgtccttggcagtggtagaggcagtcaggtcaataccaggatatgaggac
attgagctgcgagttaagtggccaaatgatatttactacagtgatctgatgaagctcggt
ggagttctggtcaactcaacactcgttgaaacaacgtttcatattctcattggctttggc
tttaatgtgaataacagcaaccccaccatctgcatcaatgatctcattgcaaagtttaac
aaggaagaggggacagagctgaagcctctgagtgcagactgtctcattgcaaggactgtg
actgtgctggagaggctcatagagatttttcaggagaaggggcccaatggagttcttccc
cagtactacaagtattggatacacagcgggaagcaggtccgtctccgcggtgaggagggc
ccgcttgcctggatcgttgggatagatgactatggatacctccaggtgcacgaggagggc
aagggcgtcgagtctgtgcacccagatggcaactcctttgacatgctgaggaacctcatt
gtccccaagcactga
DBGET
integrated database retrieval system
