Corvus cornix (hooded crow): 104696873
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Entry
104696873 CDS
T03546
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00100
Steroid biosynthesis
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104696873 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccw01006
]
104696873 (FDFT1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104696873 (FDFT1)
Prenyltransferases [BR:
ccw01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104696873 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
104696873
NCBI-ProteinID:
XP_039425373
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All DBs
Position
3:complement(112078001..112089283)
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AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSYLYQPDWKYMESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTHLANSMGLFLQKTNIIRDYLEDQMEGREFWPREVWSRY
AKKLSDLAKPENIDVAVQCLNELITNALHHVPDVLTYLSRLRNQSVFNFCAIPQVMAIAT
LAACYNNQQVFRGVVKIRKGQAVTLMMDATNIKAVKAIMYQYVEEIYQKIPSTDPSSNKT
QQVIASIRAASLPGSPVASRHHYSPIYLSCAMLLAALSWQYLSTLSKAAEEYVQAGDN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcggaaatggctgggccaccccgaggacatctacaacctgctgcgcttc
aagatgggcggctaccgcgccgtcatgccgcggatggacacggactcgctgggatgcggc
ctccgaacctgctaccggtacctcaaccagaccagccgcagcttcgccgctgtcatccag
gctctggacggagagctgcgacatgcagtctgtatattctacctggttctccgtgccctg
gacactgtagaggatgacatgagcatccccttggatgtcaaggtcccgatgctgcacgag
ttccactcctatctctaccagccagactggaagtacatggagagcaaggagaaggaccgg
caggtgctggaagacttcccaacgatctccatggagttcaggaacctgtccaaggtctac
caggatgtgatttcggatatttgccacaagatgggcgttgggatggcagagttcttggag
aagaaggtggattctcagcatgagtgggataagtattgtcactacgttgctgggctggtg
gggattggcctttcccgtctcttctctgcgtcagagctggaagattccatcgtggggcag
gacacgcatctggcaaactccatgggcctcttcctacagaaaaccaacatcatccgtgac
tatctggaggaccagatggagggaagggagttctggcccagagaggtttggagcagatat
gccaagaagctctcggaccttgccaagccagagaacatcgacgtggccgtgcagtgcctc
aatgaactcatcaccaacgccctccaccacgtccccgacgtcctcacctatctgtcccgc
ctcagaaaccaaagtgtcttcaacttctgcgctatcccccaggtgatggccattgccacg
ctggctgcctgctacaacaaccagcaggtgttcaggggggtggtgaagatccgcaaggga
caggctgtcaccctcatgatggatgccaccaacataaaagctgtcaaagccatcatgtac
cagtacgtggaagagatctaccagaagatcccgagcacggacccctcgtccaacaagacg
cagcaggtcatcgcctccatccgcgccgcgagcctgcccggcagccccgtggcctcccgc
caccactactcccccatctacctgtcctgtgccatgctcctggcggccctgagctggcag
tacctcagcaccctctccaaggccgctgaggagtacgtgcaggcaggggacaactga
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integrated database retrieval system
