Corvus cornix (hooded crow): 104697095
Help
Entry
104697095 CDS
T03546
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04010
MAPK signaling pathway
ccw04210
Apoptosis
ccw04218
Cellular senescence
ccw04620
Toll-like receptor signaling pathway
ccw04621
NOD-like receptor signaling pathway
ccw04622
RIG-I-like receptor signaling pathway
ccw04623
Cytosolic DNA-sensing pathway
ccw04625
C-type lectin receptor signaling pathway
ccw04920
Adipocytokine signaling pathway
ccw05132
Salmonella infection
ccw05164
Influenza A
ccw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104697095 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104697095 (NFKB1)
04218 Cellular senescence
104697095 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104697095 (NFKB1)
04621 NOD-like receptor signaling pathway
104697095 (NFKB1)
04622 RIG-I-like receptor signaling pathway
104697095 (NFKB1)
04623 Cytosolic DNA-sensing pathway
104697095 (NFKB1)
04625 C-type lectin receptor signaling pathway
104697095 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
104697095 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104697095 (NFKB1)
05168 Herpes simplex virus 1 infection
104697095 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
104697095 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104697095 (NFKB1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
104697095 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
104697095
NCBI-ProteinID:
XP_039406722
LinkDB
All DBs
Position
4:complement(31527985..31585549)
Genome browser
AA seq
980 aa
AA seq
DB search
MAEDSYIMGVSDPQMFAVDQFMGMNAFFNSTNYITSDLPLRTDGPYLQIIEQPKQRGFRF
RYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVGKF
CEDGVCTVNAGPKDMVVGFANLGILHVTKKKVLETLETRMIDACKKGYNPGLLVHPELSY
LQAEGCGDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVISD
AIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWEGF
GDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKE
EVQRKRQKLMPNFSDGYGGGSGAGGGGMYGGAGGGAGSGFSFPSYGYSAFGGMHFHPGTT
KSSAGMKHEGLSNCAAEQDRKSSDKQSDKWDMKHDVKVETMERTECRTSAVNEEKEDSVS
SCKTEVSEADCRWQDALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQDDNG
DNVLHLAIIHLHTDLVKNLLEVMPDLNYKDIINMRNDLYQTPLHLAVITKQAKVVEDLLK
AGADVSLLDRHGNSVLHLAATEGDDKILSLLLKHERVSPMVNLPNGEGLSAIHMAVMANS
MSCLKQLIAAGVNVNAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTPL
HIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDDQDDEGIVPGTTPLDMAANCEV
YDILNGKPYESAEVLEDLLTQGHLRELSESSKMQLYKLLELPDPTKNWSTLAQKLGLGIL
NNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDHTEAIEVIQEALSSSRRLSPLEDS
TAKALPSSSSLTFANGETAELCNSRFQDPESTCDSGVETSFRKLSFTYSDSLNSKSSLTL
GKMALGYGHDSSGHSNYIAE
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagattcctatattatgggagtatctgatccccaaatgtttgcagtggatcag
ttcatgggaatgaatgcattttttaatagtacaaattacatcacttcagacttaccacta
cgaacagatggaccatatcttcaaatcatagaacagccaaaacagaggggatttcgtttc
cgatacgtatgtgaagggccttcgcatggtggacttcctggtgcttctagtgaaaagaac
aaaaagtcataccctcaggtcaaaatctgcaactatgttggaccagcaaaagtaattgtc
cagttagtaacgaatgggaaatacgtccacttacacgctcacagcttggtgggtaaattc
tgtgaagacggagtgtgcacggttaacgcaggacctaaggacatggttgtagggtttgca
aatcttggaatacttcatgtcacgaagaagaaagtgttagagactctggaaacacgcatg
atagatgcttgcaagaagggatacaacccaggactcctggtgcatccggaactcagctat
ctgcaggcagaaggatgtggagacaggcagctaactgaacgggagagagaaatcatccgc
caggcagccatccagcagaccaaggaaatggatctcagcgtggtgcggctcatgttcaca
gcctttcttcctgacagcaacggcagcttcacacggaaacttgatcccgttatatcggat
gcaatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatggacaga
acagcagggtgtgtgacaggaggggaagagatttacctgctgtgtgacaaggttcagaaa
gatgatattcagatacgtttctatgaagaggatgagaatggtggtatgtgggaaggcttt
ggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaacacccaag
taccgagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtaggaaatct
gatctagaaacaagcgaaccaaagccttttctctactatccggaaatcaaagataaagaa
gaagtgcaaaggaaacgacagaaactcatgccaaacttctctgatggctatggtggaggc
agtggcgccggaggtggtggcatgtatggaggggcaggtggcggtgctggctctgggttc
agttttccttcatacggatactctgcctttggagggatgcatttccaccctggcacaaca
aagtccagtgctggcatgaaacatgaaggtctatcaaattgtgcagctgaacaagacagg
aagagctctgataaacaaagtgacaaatgggacatgaaacatgatgtgaaggtggaaacc
atggagaggactgagtgcagaacatctgctgttaatgaggagaaggaggattctgtttct
tcttgtaaaactgaagtaagcgaagcagactgcaggtggcaggatgctctgttcctggag
aaggccatgcagcttgccaggcgtcactgcaatgctctctttgattatgccgtaactgga
gatgtgaagatgctgttggcagctcagcgccatctcaccgctgtccaggatgataatgga
gacaatgtccttcatttagcaattatccaccttcatactgacctggtgaaaaacctcttg
gaagtgatgcccgatttgaattacaaggacataattaacatgagaaatgacctctatcag
acccccctgcacctggcagtaatcacaaagcaggcaaaggtggtggaagacttgctgaag
gctggagcagatgtcagccttctggatcgccacggcaattctgtcttacatttagctgct
actgaaggagatgacaagattctgagtctactcctcaagcatgagagggtatctccgatg
gtcaaccttcccaatggagaaggtctcagtgcaattcacatggcggtgatggcaaatagc
atgtcctgcctcaaacagctgattgctgctggagttaatgtcaatgctcaggaacaaaaa
tctggacgaactgcattgcatttggctgttgaacaagagaacatccctttggcaggctgc
cttttgcttgagggtgatgcagatgtggacagtactacatatgatgggacaactccactt
cacatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagcaggtgca
aatcctcacattgagaactttgagccattgtttgatctagatgatgtgaaagatgatcaa
gatgatgaagggattgtgcctggaacaacaccactggatatggcagccaattgtgaggtg
tatgacatattgaatggcaaaccctacgagtcagcagaggttttggaggacttactgaca
caaggacatttgagagagctgagtgagagttccaagatgcagctttacaagctattggaa
ttgcctgatccgaccaaaaactggtccaccctagcacaaaaactgggtcttggcatactt
aataatgccttcaggttgagtccttccccatcaaaaactctgctggataactatgaggtt
tctggtggtacagttcaggagctcatcactgctttgagacagatggatcacacagaagcc
atagaagtaattcaggaagcactatccagctcacgcagactttctcccctggaggacagt
acagcaaaagctcttccctcatcatcatcgctcacctttgcaaatggagagacagctgag
ctctgtaatagcagatttcaagaccctgaaagcacatgtgacagcggtgtggagacctcc
ttccgcaagctgagtttcacttattcagactctctgaacagcaagtcctcactaacactt
ggcaaaatggccctgggctatggacatgacagttcagggcatagcaattatatagctgag
tag
DBGET
integrated database retrieval system
