Campylobacter coli RM4661: YSS_06215
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Entry
YSS_06215 CDS
T03166
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy00540
Lipopolysaccharide biosynthesis
ccy01100
Metabolic pathways
ccy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
YSS_06215
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ccy01005
]
YSS_06215
Enzymes [BR:
ccy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
YSS_06215
Lipopolysaccharide biosynthesis proteins [BR:
ccy01005
]
Core region
YSS_06215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Ldh_1_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AHK77105
LinkDB
All DBs
Position
complement(1160560..1161513)
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AA seq
317 aa
AA seq
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MKIAITGGAGFIGSQLALNLQEKHEILIIDKMRSSATFENGNLQSFGHFKNLLEFDGELF
AGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTNLNTFKDFIELSIDLNAKL
IYASSASVYGDAKSPQTVGKDEEPKNPYAFSKLMMDKLAKKYYDKAHLVGLRYFNVYGKG
EFYKDKTASMVLQFGHQILAGKNPRLFERSDQIYRDFTYIKDVINANLIALDSKCGVYNV
GSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTEAKLDQTWDYQPKFSLEEGI
KDYLDEIKRLFEKEVNA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcaatcacaggtggagcaggatttataggttcgcaactggctttaaattta
caagaaaaacatgaaattttaatcatcgataaaatgcgtagtagtgcgacttttgaaaat
ggaaatttgcaaagttttgggcattttaaaaatttacttgaatttgatggagaacttttt
gcaggcgatattaacgatgaaaaagttttaaaaaagattgaagattttaaaccagagatt
atttttcatcaagcagcaatttcagacactacggtttttgatcaaactaaggttttgcaa
accaatttaaatacttttaaagattttatagaacttagcatagatcttaatgcaaagctt
atttatgcaagttcagcttcggtttatggtgatgcaaaaagtccacaaactgtaggtaag
gatgaagaaccaaaaaatccttatgctttttcaaaattgatgatggataagttagcgaaa
aaatattacgataaagctcatttggtaggacttagatattttaatgtttatggaaaaggc
gaattttataaagacaaaaccgcttctatggttttacaatttggccatcaaattttagca
ggaaaaaatccacgcttgtttgaaagaagtgatcaaatttatagagattttacttatatt
aaagatgttattaatgccaatttaatcgcccttgattcaaaatgcggggtttataatgta
ggcagtggtaaagcaagaacctttcaagatatagtcgatattttgcaaaaagagttaaag
actgatttgccttgtgaatatatcccaaatccttatgtaaaatcttatcaattccatact
gaagcaaaactagatcaaacttgggattatcaaccaaaatttagtcttgaagaggggatt
aaagattatttagatgagataaaaagactttttgaaaaggaagtaaatgcttga
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