Corynebacterium diphtheriae CDCE 8392: CDCE8392_1964
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Entry
CDCE8392_1964 CDS
T01700
Symbol
irp2C
Name
(GenBank) putative siderophore biosynthetic protein
KO
K12240
L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:
6.2.1.69
]
Organism
cdd
Corynebacterium diphtheriae CDCE 8392
Pathway
cdd01053
Biosynthesis of siderophore group nonribosomal peptides
Brite
KEGG Orthology (KO) [BR:
cdd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
CDCE8392_1964 (irp2C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
cdd01008
]
CDCE8392_1964 (irp2C)
Enzymes [BR:
cdd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.69 L-cysteine---[L-cysteinyl-carrier protein] ligase
CDCE8392_1964 (irp2C)
Polyketide biosynthesis proteins [BR:
cdd01008
]
Nonribosomal peptide synthetase (NRPS)
Nonlinear NRPS
Pyochelin synthetase
CDCE8392_1964 (irp2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
TubC_N
Methyltransf_12
Thioesterase
PP-binding
Methyltransf_25
Methyltransf_31
Methyltransf_11
AMP-binding_C
Methyltransf_23
DLH
Abhydrolase_1
Methyltransf_PK
Methyltransf_2
DREV
Motif
Other DBs
NCBI-ProteinID:
AEX72947
LinkDB
All DBs
Position
2064601..2070135
Genome browser
AA seq
1844 aa
AA seq
DB search
MDVTALINDLESRGIALWVNGDRLNYRSPKGSLREEDLAALRSNKEKVLAWLREREAVPH
DEQARFAPFPMTDIQRAYATGQNEGYDLGGTGCHSYAEIRTERLDRSRLEQAWHELIQRH
DMLSAVVVPPDSLQVVKSRSLPVLQAVDLAGHNPDVPDAEYLRHRAKLENRSYPLGTWPL
HEFQLLQFDECSILQFSVDMIIADFVSVRVMVEELLTLYAGNVLPELEDTTFRDIITSRN
HHSQSAAGFAARTNAKKYWSEIIPSLSGKPLLPTLTSADRTSEMPVRFTRRTWRCSPAAW
SKLTDAASTHGVTPSATLLTAYADVLRRWSSTSDFCVNVTSMNRDSAIAGINRIIGDFTE
MTLHACHPHTGTFSERVHATQEQLSEELSHAAYSGVDVLRDIARTTGQPAVIPVVFTSAL
GADTPHNNGPAYNLVSGVSRTPQVWIDCQAFQDGGSCNVNWDVREDVFEPALIDDMWESF
TDLLDRLVDDGSAWQETDSVHLPDKTIAIRNRIHKTHVQQTTRCLHDGFWDNVQQHPHQP
ALVCGGKTYSYQHLAGYVGALQHELSDVGPGDYIAIVLGNGVWQIAAAVAVVSTGAAYVP
IDHEQPAIRQRSMIEACRPANVITNSHFSEENTDISNINVDTLSPIQYSGTIASPVSPTE
TAYIIFTSGSTGIPKGVVVTHSAAMNTIDSVNNLLGRNKRRTVLGVSKLSFDLSVYDIFG
TFASGGTLVLPLDEESRNPSKWIDFLVDNNVDTWNSVPALFQMLVREVEVTRHPNILSLD
LVMLSGDRIPGTLPAHAAPHFPNAELISLGGATEGGIWSIFHPMTCHTNETSIPYGTALP
NQGMWVLDEACNECPDWVRGQIHISGESLATGYLNDPTSTAEKFFFSEKHGTRMYATGDI
GSYRPDGVIEFHGRRDNQLKINGYRVETGEIEGVLESNDFVERAIVLAQETSDPIKLHAF
VTDAQSDKDELKDAGQIRNSELRTMLEQRWTPADTSLDTGIFATWMRLGNEAAMAALLAA
FQQAGVFLVAGKYHTLTEITAAIHPSEEYRELITRWLNILTGEGLATKDDEGWTVSQQTL
DFFVFGEAWDQFGNMEAEINNSKELFNYQRHAAEALLSQLRGEISPTEVFFPEGDTHNAR
TIYGENRISKAMNAAAAEAVIGIAEHHADHPVRILEVGAGIGATTEKIVSRLPENVIEYR
FTDISTFFLHKAQKMFAHCGAMTYGLFDMNSDCTSQDVEFGGYDIILCANVLHNSVNIEE
SFTRLKQLRRPGGVIVIVEPITELYAALISVSIKMNLVDFTDHRAESHKVFIEDAQWDQV
FRDTQMHRIAEYPNTSDPLRECGQRLIIVGADDDDVPTLNSEDILGYLRAHLPGYMVPAS
VNVLPELPLTSNGKVDRKALAQLCLEPVGSPNNRIDPPRNETEEQIATIWRDVLDTTEVG
RNDDFYALGGDSLLMAETVTRLRQEIPGLQQHTWDALMRGVLKVPTIAGISALAQAAGSS
CQPEALKAVNSANHTSPELTALSTVASGSPTGSSNLHVYRLPKDATFCRVMIHAGTGRLK
DYEFLMPELLQRQPEIAHVGFTAGDADRFLDYTTRTLIRDLAQSYAQELDELDMESYQLV
GYCIGGMLALETAKALTELGRDVRQVTCISTHQCPHRVTNELLCELAYGCIFNADLSAMG
ANFDLKTLAAALEHTLDGINRNISDEELCTLEGPYADIGEFFQKMAVLSPRARRKLIYRS
IREFDTDSESTRGMLDILYDVFRHSLLGTIDYVPDVYFGDVVVLQPTEGVTGFYPSLGGD
IDWPATVLGNLQIHAVAGSHATCLLQENVPSLLPFFTEREQRNG
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcacagcgctgattaacgaccttgaatcccgcggtatagcgctatgggtgaac
ggcgatcgactcaactaccgttcacccaagggttccttgcgcgaggaagacctcgcggcc
ttaaggtcaaataaggaaaaggttttggcatggttgcgtgagcgggaggccgttccgcat
gatgagcaagcacggttcgcccccttccccatgaccgatattcagcgcgcatacgcaacc
ggtcagaacgaaggctatgatctgggtggcaccgggtgccacagctacgccgaaatacga
acggaacgccttgatcgcagccgccttgaacaggcctggcacgaactcatccagcgccat
gacatgctctctgcagtggtcgttccaccggattcgctgcaggtggttaaatctcgcagt
ttgccggtgctacaagctgtagacctcgcgggccacaacccagatgtcccggacgccgag
tatcttcgtcaccgcgcaaaattggaaaaccgtagctacccgttgggcacctggccactg
cacgaattccagcttttgcaatttgacgaatgcagcatcctacagttttcggtggacatg
atcatcgccgactttgtaagcgtgagggtgatggtcgaggaacttctaactctctacgca
ggtaacgttctaccggaactagaggacaccacgtttcgggatataatcacctcccgtaac
caccacagccagagtgccgctggcttcgctgcacgcaccaatgcaaaaaagtactggtcc
gagatcatcccctcgttgtccggcaaacccttactgccgacgctgacctcagccgatcgc
acatccgaaatgccggtgcgtttcacccggcgtacctggcgatgctcgccagcagcatgg
tcaaagctcaccgacgcagcaagcactcacggcgtcactccttcggcgacgctacttacc
gcctacgccgatgtactgcgccgttggtcctccacaagtgacttttgcgtcaatgtcact
tcgatgaaccgagattctgccattgccggaatcaaccgtattatcggagactttaccgag
atgaccctacatgcttgccatccgcacactggaacctttagtgagcgcgtgcacgcaacc
caggagcagctatccgaagagctatcacacgctgcgtattccggggttgacgtgttgcgc
gatatagcccgcactaccgggcagcccgcggtaatcccggtagtattcaccagcgcgttg
ggtgcagacacaccgcacaacaatggtccggcctacaaccttgtctccggcgtaagccga
acgccgcaggtatggattgactgtcaggcattccaggacggaggctcttgcaacgtcaac
tgggacgtgcgagaggacgtctttgaaccggcgttgatcgacgacatgtgggagtcattt
accgacctactcgatcgcctggtcgacgacggttcggcgtggcaggaaactgattcagtc
cacttgcccgataagacgatcgccatccgtaaccgcattcacaaaacccacgtacagcag
accacccgatgcctccacgacgggttttgggataacgtccagcaacacccacaccagcca
gcgctggtgtgtggcggaaaaacctacagctaccaacatctggctggctacgtcggggca
ttacagcatgagctctctgatgtcggtcccggagattacattgccatcgtcctaggtaac
ggagtatggcaaatagctgccgctgttgccgtggtatcaactggtgcagcctacgtgccg
atcgatcacgagcaacccgcaatccgccaacgttcaatgatagaagcgtgtcgtcctgcc
aacgtcatcactaattctcatttctccgaagaaaataccgatatctccaacatcaacgtc
gatactctcagcccgatacagtacagtggcaccatagcctcaccggtttcccccaccgaa
accgcctacatcatcttcacctcaggcagcaccggaattccaaaaggtgttgtcgttacg
cactcggctgcaatgaacaccatagatagcgtgaacaatctcctcggccgaaataaaaga
cgcacggtattgggggtatcgaagttatcctttgacttatccgtgtatgacatcttcggt
accttcgcaagcggtggcactttggtcctgccgttagacgaggaatcgcgaaaccccagc
aaatggatcgatttccttgttgataacaacgtcgatacctggaactctgttcctgcactg
ttccaaatgcttgtgcgagaggtagaggtgacccgtcacccgaacatcctcagcctagac
ctggttatgctgtccggagacaggatcccgggcactctcccagcgcatgctgcaccccac
ttccctaatgctgaactcatcagcctcggcggcgccacggagggcggaatatggtcgatt
ttccacccgatgacctgtcacacaaatgaaactagcataccatatggtaccgcgttaccc
aaccaaggaatgtgggtgctcgacgaggcctgcaatgagtgtccggactgggtgcgaggg
caaatccatatttccggggaaagcctagccaccggttacctcaacgatccaacctccaca
gcagagaaatttttcttttccgaaaagcatggcacacgtatgtacgctaccggggatata
ggaagctaccgcccagacggcgtaatcgagtttcacggccgtcgggacaatcaactaaaa
atcaacggctatcgagtggaaaccggcgagatagaaggagtcctcgaatccaacgacttc
gtcgaacgcgctatagtactcgcccaggaaaccagtgacccaattaaactacatgctttc
gtcactgatgcacagagcgacaaagatgagctcaaggatgctgggcaaatcagaaactcg
gagctccgtacaatgcttgagcagcgctggacacctgcagatacgagccttgacacggga
atatttgccacatggatgcggctgggaaacgaagccgcgatggctgctttgctcgcggct
ttccaacaagccggtgttttcctcgttgcaggaaaataccacactcttacggaaatcacc
gcggcgatccatccctccgaagagtatcgcgaactcataacccgttggctcaatattctg
actggagaaggcttagccactaaggatgatgagggttggactgtcagccaacagaccctg
gacttcttcgtgttcggagaggcctgggatcagttcggcaacatggaagcggaaatcaat
aacagtaaggaattattcaattaccaacggcacgcagctgaggcgcttctttcccagttg
cgcggagagatcagtcccaccgaggtgttcttcccggagggagatacccataacgcccgc
accatttacggcgaaaaccgcattagcaaggcgatgaatgctgcggccgcagaggcagtg
atcggcattgccgagcaccacgctgatcatccggtaaggatcctcgaggtcggcgctggc
ataggtgctacgacggaaaaaattgttagccgactccccgagaacgtaatcgaataccgc
ttcaccgatatttcgacattcttcctacataaagcccaaaaaatgttcgcgcattgtggt
gccatgacctatggcctgtttgatatgaactcagactgcacatcgcaagatgtagagttc
ggcggttacgacatcattttgtgcgccaacgtactgcataattcagtaaatatcgaggag
tcattcacccgcttaaagcagctgcgccgccccgggggcgtgatcgtcatagtagagccg
atcactgaactttacgcagcccttatctcggtgtccatcaagatgaatctggttgatttc
acggaccaccgtgcggaatcacacaaggtgttcatcgaggacgcgcagtgggatcaggtc
ttcagggatacccagatgcaccgcatcgcggagtacccaaacactagtgacccgttgcgc
gaatgcgggcaacgactcatcatcgttggtgccgatgacgacgatgtccccacgctcaac
agtgaagacattctgggctacctgcgtgctcacctaccgggttacatggttccggcttcc
gtcaatgtactaccggaattgccgttaacctcaaatggcaaggtagaccgcaaggcccta
gcgcaactctgcttagaaccggtgggaagccccaacaaccggatcgatcctccacgcaac
gaaacggaagagcagatagcgactatctggcgcgatgtcctcgacaccacggaggttggg
cgcaatgatgacttctatgcgcttgggggtgactcactgctcatggccgaaacggtaacc
cggctccgccaagaaatacctggcctacagcagcacacgtgggacgcccttatgcgtggc
gtactcaaggtgccaaccatcgcaggcatttccgcgctagcacaggctgcaggaagtagc
tgtcaacccgaagcattaaaagccgttaattctgctaatcatacctcccctgaactgact
gctctgtctactgtagccagtggctctccaactgggtcttcaaatctgcatgtataccga
ttgccgaaggacgcaacgttctgccgcgtgatgatccacgctggcactggccgcctgaag
gactacgagttcttgatgcccgaactgcttcaacgccagccagagattgcccacgttggt
tttaccgctggtgacgcagatcgattcctggactacacaacccgtacgctgatcagggat
ctggcccagagctacgcccaggaacttgatgagttggatatggaatcttatcagttggtc
ggctactgcattggcggtatgttagcgctggagaccgcgaaggcgctcaccgaactcggc
cgcgacgtgcgccaggtaacttgcatcagcacccaccagtgcccgcaccgggtcactaat
gaactgctgtgtgagctcgcctatgggtgcattttcaacgctgacctaagtgcaatgggg
gcgaacttcgacctcaaaaccctcgcagcagccctggagcacacccttgatggcatcaac
cgcaatatcagtgacgaagaactgtgtacccttgaaggcccatacgcagatatcggggaa
ttcttccaaaagatggcggtgttgagtcctagggcgcgccgcaaactcatctaccgaagc
atccgtgaattcgacacagactccgagtccactcgcgggatgctggacatcctatacgat
gtcttccggcattcgttactcggaaccatcgactacgtccccgatgtctatttcggtgat
gtagtcgtactgcagcctaccgaaggtgtaactggtttttacccgagcctaggcggagac
atcgattggccagcgaccgtgctcggcaacctgcagatacatgccgtggccggttctcat
gccacctgcctgctacaggagaacgtaccctcactacttccgttcttcacggagagggaa
caacgaaatggctaa
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