KEGG   Cryptococcus deuterogattii: CNBG_1141
Entry
CNBG_1141         CDS       T09796                                 
Name
(RefSeq) DNA-directed RNA polymerase I II and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03020  RNA polymerase
cdeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNBG_1141
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNBG_1141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdeu03021]
    CNBG_1141
   03400 DNA repair and recombination proteins [BR:cdeu03400]
    CNBG_1141
Transcription machinery [BR:cdeu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CNBG_1141
  RNA polymerase III system
   RNA polymerase III
     CNBG_1141
  RNA polymerase I system
   RNA polymerase I
     CNBG_1141
DNA repair and recombination proteins [BR:cdeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNBG_1141
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 88177462
NCBI-ProteinID: XP_062881257
LinkDB
Position
3:complement(175538..176600)
AA seq 209 aa
MSHEANRELARLWRVSRTVHEMVRDRGYLLADYEINVSFEEFKDRHGATGSVDRSNMSFD
AIHESDSTDKIFVYFCADKNVSKASMKTFIGSMDKMGARRGIIIWSEKMSPAAKKTLQEM
QSEYHLEDFPESDLLVNITKHFLVPKHTIMKPEEKSALIKRYRLKETQLPRIMVTDPVAK
YYGLKRGQVMKIERASETAGRYITYRICM
NT seq 630 nt   +upstreamnt  +downstreamnt
atgtcccacgaagcgaaccgagaattagctagattatggcgtgtttcccgaactgtccat
gagatggttagagatcgaggatatttgcttgccgattatgagatcaacgtttcgtttgaa
gagttcaaggacaggcatggtgcgactggatctgtcgaccgttccaacatgagctttgat
gccattcatgaaagcgacagcaccgacaagatctttgtgtacttttgcgcggacaagaat
gttagcaaggcgtctatgaagacctttattggttctatggacaagatgggtgccaggcga
ggaatcatcatctggagtgaaaagatgtcaccggcggccaaaaagacattacaagaaatg
cagtctgaataccatctcgaagatttccccgaatctgaccttctcgttaacatcaccaaa
cacttcctcgttcctaagcacactatcatgaagcccgaagaaaaatctgctcttatcaag
cgataccgattgaaagagactcaattaccacgtatcatggtcaccgaccccgtggccaag
tactacggtttgaagcggggacaggttatgaagattgaacgagcgagtgagactgctgga
cggtacattacctatcgcatttgcatgtag

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