Cryptococcus deuterogattii: CNBG_1953
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Entry
CNBG_1953 CDS
T09796
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNBG_1953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_1953
Enzymes [BR:
cdeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CNBG_1953
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CNBG_1953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
88178336
NCBI-ProteinID:
XP_062882017
LinkDB
All DBs
Position
5:complement(254270..258394)
Genome browser
AA seq
1192 aa
AA seq
DB search
MVAAFDPLAPSQASSSTRPDNSTFHTLTRERQFRHPPPTASDVPALDELVAPHIRSFNAL
IEDEGNPGAKGLLQMGVEDIGEKVVFDGKGSEGGLGTKLSYRIDRVALSKPLVPEKDKLA
VERRVFPTEARERLATYRSKLTVNIKWTVTDEDGNRKEFEEIKECGLLPVMVRSIRCNLQ
GLPATELIKHSEESTSFGGYFIVNGNEKIIRYLVVPRRHNPINLYRPSFAKRGASYTPYG
CQIRCVRPDETACTNTIHYLSNGGATLRFAWRKVEYMIPLMLILKALVDASDKEIFEGLI
QGEYDNTFLTDRVELLLRGQKSWGLHTGAQCLDYLGEKFRVVLNVPDDWSNVQVGGYLLR
KVVLVHLPAPRDKFRMLLFMLRKLYSQVSGATCPDNPDSPQHHEVLLPGFLYGMIIKERF
DDCLNAVKSQIQLDLRDGKARSFMDPKYFTSVLSKTNWDIGSKLSYFLATGNLVSPTGLD
LQQTSGFTIVAEKLNFYRYLSHFRCIHRGAFFAELKTTTVRKLMPESWGFLCPVHTPDGS
PCGLLNHLSHTCQIVTSSLDVSHIPALLSAQGMTQVFASSIDGRRMVCIQLDGKVIGYAS
PMKAKQLANRLRKLKTEADPKVPLDLEIGYVPVTKGGQYPGLYLFSSRSRMMRPVTYLEN
GKLDHLGSFEQVYMDVAITKEEIEKGVSSHLELDPTSMLSVIANLTPFSDFNQSPRNMYQ
CQMGKQSMGTPSTAISKRTDNKMYRLQSGQTPVVRPNLHNHYGFDNFPNGTNAIVAVISY
TGYDMEDAMILNKSAHERGFGYGTVYKADIFDLKGVPGASRSTKPTLHFGLGRDVKEDHD
ARNIISEDGLPIIGTKVKTGDPLCAYIDDTTGRTKFHKYKGDETAFIDEVRVLGSDAGDA
ELQKIHIKLRIPRSPVIGDKFSSRHGQKGVCSQKFPAIDMPFSESGMQPDVIINPHAFPS
RMTIGMFVESMAGKAGALHGVAQDATPFKFSDKDRPVDYFGEQLRAAGYNYYGNEPMYSG
ITGEEFHADIYLGLVYYQRLRHMVNDKFQVRTTGPVDPLTRQPVKGRKRAGGIRFGEMER
DALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGGGQGMQEYCRICDGHEP
EHGEESKEKGVGVVMRGGEKKGRMDVVPVPYVFRYLCAEMACMGIRLNVTVT
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctgctttcgacccgctcgccccctcacaggcgtcgtcctccacccgcccggac
aactccaccttccacaccctcaccagagagcggcagttcaggcaccctccccccaccgcc
tcagacgtccccgccctagacgagctcgtcgccccgcacatcaggagcttcaacgcactt
atagaagatgagggaaacccaggcgcaaagggtctgctgcagatgggcgtcgaggacatc
ggagaaaaggtcgtctttgacggcaagggaagcgaaggcggcttgggcacaaaattgagc
taccgaatcgaccgagtcgctcttagcaagccccttgtgcccgaaaaggacaagcttgct
gttgaacgaagggtcttccctaccgaggctcgagagcgtctcgctacctaccgatcaaaa
ttgacagtcaacatcaagtggacagtcaccgacgaggatggaaacaggaaggagtttgag
gagatcaaggagtgtggtttgttgcccgttatggttcgatcaataagatgtaaccttcaa
ggccttcctgccactgagctcatcaagcacagcgaagaatctacctctttcggtggttac
tttatcgtcaacggtaacgagaagatcatccgatacctcgttgttccccgacgacacaac
cctatcaacctttaccgaccttcattcgccaagcgtggtgcttcctacactccctacggc
tgtcagattcgatgtgtccgacctgacgagactgcgtgtaccaacactattcactacttg
tctaacggcggtgctacgctccgttttgcctggcgcaaggtcgagtacatgattcctctt
atgctcatcctcaaggctctcgtcgatgcgagtgacaaggagatcttcgaaggccttatc
cagggcgagtacgacaacacttttttgactgaccgtgtggagttgttgctgcgtggccaa
aagtcatggggtctgcacactggtgcccagtgtttggactacttgggagaaaagtttagg
gttgtgctgaatgtgcccgatgactggagtaacgtccaggtcggtggataccttttgcga
aaggttgtgctggtgcacttgcctgctcctagggacaaatttaggatgctccttttcatg
ctccgaaaactttactctcaggtttctggtgctacttgccccgacaaccctgattctcct
cagcatcatgaagttcttcttcctggtttcctctacggtatgatcataaaggagcgattc
gatgactgtctcaacgccgtcaaatctcaaatccaactcgacctgagagacggcaaggcg
agaagtttcatggatcccaaatactttaccagcgttctgtcaaaaacgaactgggatatc
ggttccaagctgtcgtactttctcgctaccggtaaccttgtttcacctaccggtctcgac
ttgcaacagacatccggtttcaccatcgtcgctgaaaagctcaatttttaccgatacctc
agtcactttaggtgtatccatcgaggtgctttctttgctgaattgaagacgactactgtg
cgaaagttgatgcccgaatcatggggtttcctttgtcccgtacacactcctgatggttct
ccatgtggtctgttgaaccacttgtcgcacacctgtcaaattgtcacttcatcccttgac
gtttcccacatccccgctctcctttccgctcagggtatgacccaagtgttcgcctcttct
atcgatggtcgtcgcatggtctgcatccagcttgatggtaaagttatcggttacgcttcc
cccatgaaggccaaacagctcgccaataggcttcgaaagctcaagaccgaggcggacccc
aaagtgccgcttgatctcgaaatcggttacgtccccgttaccaagggtggtcagtacccc
ggtctctatctcttctccagcaggagtcgaatgatgcgtccagtgacttatcttgagaac
ggcaagcttgatcacttgggttcgtttgagcaggtgtacatggatgtggcgattaccaag
gaggagatcgagaagggtgtttcctctcatttggaattggaccctactagcatgttgtcg
gttattgccaacttgactcccttctctgactttaaccagagtccccgtaacatgtaccag
tgtcaaatgggtaaacaatcgatgggtactccgtcaacggctattagcaagcgtaccgac
aacaagatgtaccgactccagtctggtcaaacccccgttgttcgtcccaatcttcacaac
cactacggtttcgacaacttccccaacggtaccaacgccattgttgctgtcatctcttac
acgggttatgacatggaagacgcaatgatcttgaacaagtctgcccacgaacgagggttc
ggttacggtacagtctacaaggccgatatctttgacttgaagggtgtgcctggagcgagc
cgaagtaccaagcctactttgcactttggtctcggtagagatgtcaaggaggaccatgac
gcgaggaacatcatcagcgaggatggtttgcccatcattggtaccaaggtcaagacgggt
gaccctctgtgtgcctatattgacgacaccaccggtcgaaccaagttccacaagtacaag
ggcgacgaaaccgccttcatcgacgaagttcgtgtcctcggctccgatgctggtgacgcc
gagctccaaaagatccacatcaaactccgtatcccccgttctcccgtcatcggtgacaag
ttctcttcccgacacggtcagaagggtgtatgttctcaaaaattccccgcgattgacatg
ccgttcagcgagagcggtatgcagccggatgttattatcaaccctcacgctttcccttct
cgaatgactatcggtatgtttgtcgagagtatggccggtaaggcgggggctttgcacggt
gttgcccaggacgctacacctttcaagttttctgacaaggatcgaccagttgactacttt
ggcgagcagcttcgagcggctggttacaattattacggtaacgagccaatgtactctggt
atcactggtgaagagttccatgccgatatttacctcggtctcgtctactatcagcgtttg
agacacatggtgaacgacaagttccaagtcagaacaactggtcctgttgatcctcttacc
aggcaacctgtcaagggtcgaaaacgtgccggtggtatccgattcggtgaaatggaacga
gatgctcttatcgcgcacggcacttccttcctcttgcaagatcgactcatgaactgttcc
gattactctaccgcttgggtctgcaggaattgtggttcactcgtgtcccttggtttcgaa
gaagtcggtggcggtcagggtatgcaggagtattgtaggatctgtgatgggcatgagcct
gagcatggggaggagagtaaagagaagggagttggtgttgtcatgcgtggtggagagaag
aagggaaggatggatgtcgttcctgttccttacgtcttccgatacctctgtgcggagatg
gcttgtatgggtatcagattgaatgtgactgtgacataa
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integrated database retrieval system
