Clostridioides difficile 630: CD630_20100
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Entry
CD630_20100 CDS
T00487
Symbol
ermB1
Name
(GenBank) ribosomal RNA adenine N-6-methyltransferase (erythromycin resistance protein)
KO
K00561
23S rRNA (adenine-N6)-dimethyltransferase [EC:
2.1.1.184
]
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdf03009
]
CD630_20100 (ermB1)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
cdf01504
]
CD630_20100 (ermB1)
Enzymes [BR:
cdf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.184 23S rRNA (adenine2085-N6)-dimethyltransferase
CD630_20100 (ermB1)
Ribosome biogenesis [BR:
cdf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CD630_20100 (ermB1)
Antimicrobial resistance genes [BR:
cdf01504
]
Gene variants
Macrolide resistance genes
23S rRNA methyltransferases
CD630_20100 (ermB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
PCMT
Methyltransf_31
NodS
Methyltransf_11
Methyltransf_32
MTS
DOT1
TRM13
Met_10
CMAS
Csm1_B
Methyltransf_23
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
CAJ68894
UniProt:
Q187X3
LinkDB
All DBs
Position
complement(2319374..2320111)
Genome browser
AA seq
245 aa
AA seq
DB search
MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELD
SHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGSIPYHLSTQIIKKVVFESRAS
DIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIKQLLKLPAECFHPKPKVNSALIKLTRHTT
DVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKYAKVNDLSTVTYEQVLSIFNSYLL
FNGRK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaatataaaatattctcaaaactttttaacgagtgaaaaagtactcaaccaa
ataataaaacaattgaatttaaaagaaaccgataccgtttacgaaattggaacaggtaaa
gggcatttaacgacgaaactggctaaaataagtaaacaggtaacgtctattgaattagac
agtcatctattcaacttatcgtcagaaaaattaaaactgaatactcgtgtcactttaatt
caccaagatattctacagtttcaattccctaacaaacagaggtataaaattgttgggagt
attccttaccatttaagcacacaaattattaaaaaagtggtttttgaaagccgtgcgtct
gacatctatctgattgttgaagaaggattctacaagcgtaccttggatattcaccgaaca
ctagggttgctcttgcacactcaagtctcgattaagcaattgcttaagctgccagctgaa
tgctttcatcctaaaccaaaagtaaacagtgccttaataaaacttacccgccataccaca
gatgttccagataaatattggaaactatatacgtactttgtttcaaaatgggtcaatcga
gaatatcgtcaactgtttactaaaaatcagtttcatcaagcaatgaaatacgccaaagta
aacgatttaagtaccgttacttatgagcaagtattgtctatttttaatagttatctatta
tttaacgggaggaaataa
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