Camelus dromedarius (Arabian camel): 105084935
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Entry
105084935 CDS
T04642
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X2
KO
K06527
vascular cell adhesion molecule 1
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04064
NF-kappa B signaling pathway
cdk04514
Cell adhesion molecules
cdk04668
TNF signaling pathway
cdk04670
Leukocyte transendothelial migration
cdk04933
AGE-RAGE signaling pathway in diabetic complications
cdk05143
African trypanosomiasis
cdk05144
Malaria
cdk05417
Lipid and atherosclerosis
cdk05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
105084935 (VCAM1)
04668 TNF signaling pathway
105084935 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105084935 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
105084935 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
105084935 (VCAM1)
05143 African trypanosomiasis
105084935 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
105084935 (VCAM1)
05418 Fluid shear stress and atherosclerosis
105084935 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105084935 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cdk04090
]
105084935 (VCAM1)
04091 Lectins [BR:
cdk04091
]
105084935 (VCAM1)
CD molecules [BR:
cdk04090
]
Proteins
105084935 (VCAM1)
Lectins [BR:
cdk04091
]
I-type lectins (Siglecs)
105084935 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set
V-set
ICAM_N
Ig_4
Ig_5
C2-set_2
Ig_6
Izumo-Ig
ICAM1_3_5_D2
C1-set
Receptor_2B4
TrkA_C
Motif
Other DBs
NCBI-GeneID:
105084935
NCBI-ProteinID:
XP_010973438
LinkDB
All DBs
Position
9:8566127..8636684
Genome browser
AA seq
733 aa
AA seq
DB search
MPRKMVVIFAASSTLWMVFAASQAFKIETSPASKIIAQLGDSISMTCSTTHCESPAFSWA
ALMDRPLNGKVINEGNRSTLVTNPVNLENDYSYLCFVTCESKKRRREFSVEIYSFPKDPE
IHFSGHPELGKPVTVTCFVPDVYPSDKLRIELLKGNQFLSQKEFLDPADVKSQETKSLEA
TFTPADEDNGTALVCRATLNVYEIDSEPQVRETTEQLHIYVSPKDTVISVSPSTRLQEGD
SVTMTCSSRGLPAPQIFWRKKLDNGDLQLLSENATLTLIAMRMEDSGTYVCEGVNKVGQD
REEVTLIVQEKMFTVEISPGPWVAAQIGDLVVLTCIVTGCESPSFSWRTQLDSPLSGNVN
TEGSRSTLTLSPVSLEHEHSYQCAVTCGHDKELERKTQVKLYLFPRNLEIEMSGLFVSGK
PVTVRCQVPDVYSFDRLEIELLKGESIMKNKTFLRDVDTKSLETKSLEMTFIPTTEDTGK
VLVCQAKLSIDEMEFELKQKQNTQTLYVNVAPQVTAILVSPSSVLEEGGSVNMTCSSDGL
PAPKTLWSKQLNNGDLQPLSENTTLTLTSTKMEDSGIYVCEGINQAGISRKEVELIIQVA
PKDIQLTAFPSESVREGDTVIISCTCGNAPQTLIILKKKAETGDTLLKSTDGAYTIHKAQ
LQDAGVYECESKNEVGFQLRSITLNVKERESSKDYFSPELLVLYCASSLVIPATGMIIYF
ARRANMRGSYSLV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagatggtcgtgatctttgcagcctcaagtacactttggatggtgtttgca
gcttctcaagcttttaaaattgagacgtcccctgcctccaaaattattgctcagcttggt
gactccatttcaatgacttgcagcacaacacactgtgagtccccagctttctcgtgggca
gctctcatggacaggccgctgaatgggaaggtgataaacgaagggaacagatctacgctg
gtcacgaatcctgttaatttggagaatgactactcttatttgtgcttcgtgacttgtgag
tcgaagaaacgtcgaagagaattctcagtggagatctattctttccctaaggacccagag
attcatttcagtggccatccagagcttgggaagccagtcactgtcacgtgttttgtccct
gatgtttacccgtctgataagctgaggatagaattactgaagggcaaccagttcctgagt
cagaaggaatttctggaccctgcggatgtaaagtcccaggaaacgaagagtttggaagca
acttttactcctgctgacgaggataatgggacagctcttgtttgtcgagctacattaaac
gtttatgaaattgattctgagcctcaagtaagggagactacggaacaactgcacatctac
gtctcgcccaaggacacggttatatctgtgagtccctccacaagactgcaagaaggtgac
tccgtgacgatgacatgctccagtagaggtctaccagcgccacagattttctggagaaag
aaattagacaatggggatctacagctcctttctgagaatgcaacgctcactttaattgct
atgaggatggaagattctggaacttatgtgtgtgaaggagttaataaggttgggcaagac
agagaagaggtgacattaattgttcaagagaaaatgtttactgtagagatctctcctgga
ccctgggtcgctgctcagattggtgacttggtcgtgttgacatgtattgtcacgggctgt
gagtccccatctttctcttggagaacccagctagacagccccctgagcgggaatgtgaac
accgagggatccagatccacgctgaccctgagccctgtgagtcttgagcacgaacattct
taccagtgtgccgtgacatgtgggcatgataaggaactggaaaggaaaacccaagtgaag
ctctacttattccctagaaacctagaaattgagatgagtggtctgttcgtgagtggaaag
cccgtcactgtaagatgccaagttcctgatgtatattcttttgatcgactggaaattgaa
ttgcttaagggggagagtattatgaagaataagacctttctgagagatgtagatacaaaa
tccctagagacgaagagtttggaaatgaccttcatccccaccactgaagatactggaaaa
gttcttgtttgtcaggctaagttatctattgatgaaatggaattcgaactcaaacaaaag
cagaatacacagacactttatgttaatgttgctccccaggttacagccatcttggtcagc
ccctcctccgtcctggaggaaggcggttctgtgaacatgacatgctctagcgatggactt
ccagctccaaaaaccctgtggagcaagcagctaaataatggggatctccagcctctttct
gagaatacaactctcaccttaacgtccacaaaaatggaagattctggtatttatgtgtgt
gaaggaattaaccaggctggaataagcagaaaagaagttgaattaattatccaagttgct
ccaaaagatatacaacttacagcttttccttctgagagtgtcagggaaggagacacggtc
attatctcttgtacgtgtggaaatgctccccagactttgataatcctgaagaaaaaagca
gagacgggtgacacactgctgaagtctacagatggcgcatataccattcacaaggcccag
ttacaggatgcgggagtatatgagtgtgaatctaaaaatgaagttggctttcagttaaga
agtataacgcttaatgttaaagaaagagaaagtagcaaggactatttttctccggaactt
ctcgtgctctattgtgcatcctccttagtaatacctgccactggaatgattatttacttt
gccagaagagcaaacatgagagggtcatacagccttgtataa
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