Camelus dromedarius (Arabian camel): 105089048
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Entry
105089048 CDS
T04642
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X2
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04612
Antigen processing and presentation
cdk05145
Toxoplasmosis
cdk05152
Tuberculosis
cdk05164
Influenza A
cdk05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
105089048 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
105089048 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
105089048 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
105089048 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
105089048 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cdk01001
]
105089048 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cdk04054
]
105089048 (CIITA)
Enzymes [BR:
cdk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105089048 (CIITA)
Protein kinases [BR:
cdk01001
]
Serine/threonine kinases: Other
TAF1 family
105089048 (CIITA)
Pattern recognition receptors [BR:
cdk04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
105089048 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
105089048
NCBI-ProteinID:
XP_010978349
LinkDB
All DBs
Position
18:29892923..29939049
Genome browser
AA seq
1210 aa
AA seq
DB search
MNHFQTILTQVRMLLSSHRPSQVQALLDNLLAEELLSREYHYALLQEPDGEALARKISLT
LMEKGDPELALLGWVWSGLPTSAAEKDPGYKDLGGSGQCATMELGPIEGGYLELLNSNAD
PLQLYHLCDRMDVAGEEETELYSEPDTDTINCEQFSRLLCAMEGDEETKEAYANIAELDQ
YVFQDSQLEGLSKDIFIEHIGLEEMIGESVEVLEEAGQKSQKRPFPEELPADLKHRKLAE
PLTMPMVTDTFLVGPVSDSLAQPCPAPPALFNKESASSQIRLEDTVLMPGPPSSSLLSCF
SLPAGSIQIIPTVSTLPQGLWQISGAGAGLSSIVIYRGEMPQASQTPTSSGPPVHNFPKS
PDRPGSTSPFAPSAADLPSMPEPALTSRANLTEDETSPTQSPAALKPSSKLPRWPESVEQ
FCRSLRDKYQAKPAGPEGILVEVDLVRVRLERSSSKGQERELATLDWAERQPARGGLAEV
LLATSDRRRPRETQVIAVLGKAGQGKSHWAQAVSWAWACGQLPQYDFVFCIPCHCLDRRG
DTYRLQDLLFSPGLQPRPVEDEVFSYILRRPDRILLILDAFEELETQDGFLHSACGPGSA
EPRSLRGLLAGLFQRKVLRGCTLLLTARPRGRLAQSLSKADAVFEVAGFSAQQAETYVMR
YFETSGATEHQKRALALLQAQPFLLSHSHSPTVCRAVCQLSEALLELDDEAELPSTLTGL
YVGLLGPAAHDSPPGALVGLARLAWDLGRRHHSSLREDQFPSAEVRAWAVARGLVQPTRR
GPETELVFSSFLLQCFLGALWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVG
LVFQPRPRCLGALVGLAAATSADRKQKVLTRYLKRLQPGTLQVGRLLELLHCAHEALDAG
LWQHVLHGLPARLSFLGTRLSPPDTYVLGSALEAAGRNFSLDLRSTGIDPTGLGTLVGLS
CVTHFRATLSDTVGLWESLQQRGEAKLLRAVEEKFTIEPFKATSMKDVEDLGNLVQIQRT
RSSSEDTAGELPAVRDLKKLEFALGSALGPQAFSKLVRILEAFSSLQHLDLDSLSENKIG
DEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAKALPSLAASLVRLSLYNNYICDAG
AESLAHVLPDMVSLRVLDVQYNKFTAAGAQQLTASLRKCPQVETLAMWTPTIPFGVQEHL
QQLDSRIILR
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagaccatcctgactcaggtccggatgctgctctccagtcatcggccg
agtcaggtgcaggcactcctggacaacctgctggcagaggagcttctctccagggagtac
cactatgccctgctccaggagccagatggtgaggctctggcccggaagatctccttgacc
ctgatggagaaaggagacccagagctggccctcttgggatgggtctggagtgggctgccg
acctcagcagctgagaaggaccctggctacaaggaccttggtggcagtggacagtgtgcc
accatggagttgggacctatagaaggcgggtacctggagcttctcaacagcaatgccgac
cctttgcaactctaccacctctgtgaccggatggatgtggctggagaagaagagacagag
ctctactcagaacccgatacggacaccatcaactgcgaacagttcagcaggctgttgtgt
gccatggaaggtgatgaagagaccaaggaggcttatgctaatatcgcggaactggaccag
tacgtcttccaggattcccagctggagggcctgagcaaagacattttcatcgagcacata
ggactggaagaaatgatcggtgagagtgtggaggtgctggaggaagcaggacagaaaagt
cagaaaagacccttcccagaggagctgcctgcggatctgaagcacaggaagctagccgag
cccctcaccatgcccatggtgactgacactttcctggtggggccagtgagtgactccttg
gctcagccctgcccggcaccacctgctctgttcaacaaggaatcagcatccagccagatc
cggctggaggacactgtcctgatgcccgggcccccttccagttcattgttgagctgcttc
agcctccctgctggatccatccagatcatccccactgtttccactctgccccaagggctc
tggcagatctcaggggccggggcagggctttccagtatagtcatctaccgaggtgagatg
ccccaggccagccaaacacctacttcaagtggcccacctgtccacaacttcccgaagtcc
ccagaccgacctggctctaccagccccttcgccccatctgcagctgaccttcctagcatg
cccgaaccagccctgacctcccgtgcaaacctgacagaggatgaaacatcccccacccaa
agtccggcagctctcaagccctccagcaagcttcccagatggcctgagagcgtggagcag
ttctgccgctcactacgggacaagtaccaggctaagcctgcaggcccggaaggcatcctg
gtggaggtggacctggtgagggtacggctggagaggagcagcagcaagggtcaggagaga
gagctggccaccctggactgggcagagcggcagccggcccgagggggtctggccgaggtg
ctgctggccactagtgaccgccggcggccacgagagacgcaggtgatcgccgtgctgggc
aaagcaggacaggggaagagtcactgggctcaggccgtgagctgggcttgggcttgcggc
cagctgccacagtatgactttgtcttctgcatcccctgccactgtttggaccgtcgaggg
gacacttaccgcctgcaggatctgctcttctccccgggcctgcagccccggccggtggag
gatgaagtattcagttacatcttgcggaggcctgaccgcattctgctcatcctggatgcc
ttcgaggagctcgaaacccaagacggcttcttgcacagtgcgtgcgggcccgggtcagca
gaaccccgctccctccgggggctgctggcaggcctcttccagcgcaaggtgctacgaggc
tgcaccctgctgctcacggcccggccccgaggacgcctggcccagagcctgagcaaggct
gacgccgtgttcgaggtagccggcttctccgcccagcaggccgagacctacgtgatgcgc
tactttgagacttcgggggccactgagcaccaaaagagagccctggccctcctccaggcc
cagccgtttctcctgagtcacagccacagccccactgtgtgccgggccgtgtgccagctc
tctgaggccctcctggagctggacgatgaggccgagctgccctccacactcaccggcctg
tatgttggcctactaggcccagccgcccacgacagtcccccgggggccctggtgggactg
gccagactggcctgggacctgggccgccgtcaccacagcagcctgcgggaggaccagttc
ccgtcagcagaggtgagggcctgggctgtggccagaggcttggtgcagcccacccggagg
gggccagagactgagctggtcttctccagcttcctcctgcagtgcttcctgggggccttg
tggctggctctgagcagcgaaatcaaggacaaggagctaccacagtatctggccttgacc
ccaaggaagaagaggccctatgacaactggctggagggcgtgccgcgctttctggtcggg
ctggtcttccagcctcgccctcgctgcctgggagccctggtagggctggcagcggccacc
tcggcggacaggaagcagaaggtgctcaccaggtacctgaagcggctgcagccaggaacg
ctgcaggtggggcggctgctggagctgctgcactgcgcccacgaggcgctggacgctggg
ctttggcagcatgtgctgcacgggctcccggcccgcctctccttcctgggcacccggctc
tcgcctcccgacacctacgtgctgggcagcgccttggaggcggcaggcagaaacttctcc
ctggacctccgcagcaccggcattgaccccacgggactggggaccctcgtgggactcagc
tgtgtcacccatttcagggccaccttgagtgacacggtggggctatgggagtccctgcag
cagcgtggggaagccaagctactccgggcagtggaggagaagttcaccatcgagcctttc
aaggccacgtccatgaaggatgtggaagacctgggcaacctcgtgcagatccagaggaca
agaagttcctctgaagacacagctggggaactccctgctgtccgggacctaaagaagctg
gagtttgcgctgggttctgccttgggcccccaggctttctccaaactggtgaggatcctt
gaggccttttcctcccttcagcatctggacctagactccctgagtgagaacaagatcgga
gacgagggggtcgcccagctctcagccaccttccctcagctgaaggccctggagacactc
aacttgtctcagaacaacatcaccgacgtgggcgcctgcaagctggccaaggccctgccc
tcactggctgcgtccctcgtcaggctgagcttgtacaataactacatctgcgacgcggga
gccgagagcctggcgcatgtgcttccggacatggtgtccctccgggtgctggatgtccag
tacaacaagttcacagccgccggggcccagcagctcaccgccagcctgagaaagtgccct
caagtggagacgctggcgatgtggacacccaccatcccgtttggagtccaggaacacctg
cagcagctggactcacggatcatcctgagatga
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integrated database retrieval system
