Clostridioides difficile R20291: CDR20291_0037
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Entry
CDR20291_0037 CDS
T00998
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00900
Terpenoid backbone biosynthesis
cdl01100
Metabolic pathways
cdl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CDR20291_0037 (ispF)
Enzymes [BR:
cdl01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
CDR20291_0037 (ispF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
CBE01527
UniProt:
A0A9R0BHE9
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All DBs
Position
72247..72732
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AA seq
161 aa
AA seq
DB search
MRIGLGYDVHKLTENRKLIIGGVEIPHDKGLLGHSDADVLIHAIMDSILGALALGDIGKH
FPDTDEEYKGADSMKLLEHVYNLITSKGYKIGNIDSTIIAQSPKMAPYIESMRSNISKVL
NTDIDNINIKATTEEGLGFTGAKQGIASQSICLLLLTSQNN
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgagaataggattaggatatgatgtacacaaattaacagagaatagaaaacttataatc
ggtggtgtagagataccacacgataaaggtttgttgggtcattctgatgctgatgtattg
atacatgcaataatggattctattttaggtgctctagcattaggagatattgggaagcat
ttcccagatacagatgaagaatataagggagcagatagtatgaaattattagaacatgtg
tataatctaataacaagtaaaggatataaaattggtaatatagatagtactataattgct
caaagccctaagatggctccatatattgagagtatgagaagtaatatatcaaaagtttta
aacacagacattgataatataaacataaaggcaacaacagaagaaggtcttggttttaca
ggagcaaaacagggaatagcttcacaaagtatttgtttattattgttgacaagtcagaat
aattaa
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