Clostridioides difficile R20291: CDR20291_0728
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Entry
CDR20291_0728 CDS
T00998
Name
(GenBank) putative hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00280
Valine, leucine and isoleucine degradation
cdl00650
Butanoate metabolism
cdl01100
Metabolic pathways
cdl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CDR20291_0728
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CDR20291_0728
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CDR20291_0728
Enzymes [BR:
cdl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
CDR20291_0728
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
CBE02732
UniProt:
A0A9R0CDN1
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All DBs
Position
895342..896238
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AA seq
298 aa
AA seq
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MSKVNIFEVGPRDGFQNLKEFLETDKKLKIIDGLIASGIKQLEISSFVSPKAIPQMKDAK
EVATYCVEKYPDVKLYALVPNLYGAKVAWECGIRDISYVISLSETHNKKNINRTHEESID
ELKKIMNTYPDMNICIGMATVFGCPFEGLPKIEDAIRFAKRLWENGIREINLADTIGIAD
PKQVRETISALVEALPECRWQVHIHDTRNMGMVNTLVAIESGITTVQSTLGGLGGCPFAP
GASGNTATEDLVYMLERMGYDTGVDFVKLLELSKYQKSFVNGVYSGHHVNIKSDSCNC
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggtaaatatatttgaagttggtcctagagatggatttcaaaacctgaaagag
tttttagaaactgataaaaagcttaagattattgatggtcttattgcttcagggattaaa
caacttgaaattagttcatttgtaagcccaaaagcaatacctcagatgaaagatgcaaaa
gaagtagcaacttattgtgtagaaaaatatcctgatgtgaaactttatgcattagttcca
aatttatatggtgctaaagttgcatgggagtgtggtataagagatatatcctatgttata
tctttgagtgaaactcataataaaaaaaatataaatcgtacccatgaagagtctattgat
gagcttaaaaaaataatgaatacttatccagacatgaatatatgtattggaatggctact
gtatttgggtgtccttttgaaggtttaccaaaaattgaagatgccataagatttgctaaa
cgcctttgggaaaacggtatcagggagataaatctagcagatacaatagggattgctgac
cctaagcaagtaagagaaactattagtgcattagttgaagctttaccagagtgcagatgg
caggtacatattcatgatactagaaatatgggaatggttaatactcttgtggctattgaa
tctggaattactactgttcagtctacacttggaggattaggaggatgcccatttgctcct
ggagcatctggcaatactgcaactgaagatttagtatatatgcttgaacgtatggggtat
gatacaggagttgattttgttaaacttcttgaattatcaaagtatcagaagagttttgta
aatggagtatatagtggtcatcatgtaaatataaagtctgatagttgtaattgttag
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