Cronobacter dublinensis: AFK67_10800
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Entry
AFK67_10800 CDS
T04061
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFK67_10800
Enzymes [BR:
cdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AFK67_10800
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
ALB66947
LinkDB
All DBs
Position
2374467..2376461
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AA seq
664 aa
AA seq
DB search
MKDDLENNLLYRYSGAASPFWRLPLDSNALQLATSEAATTSHVVPLTPEQAAQIRTMGVI
TSSVTLSLSLFGELVPVHLVGRKVSRKEWAGTASAWNDTTSVARDLVQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMTPAEAAASRRNITGFFRNG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGRNEIFLICSGTDITEERRAQERLRTLANTD
AVTGLPNRNAIHEMISNAISSRGESQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLEKDQVLARLGGDEFIVLATDTSQAALEAMSSRIITRLKHPFRIGLIEVYTGCSLGI
ALAPQHGDDRESVIRNADTAMYTAKENGRGKFCVFCPEMNQRVFEYLWLDTNLRKALEKN
QLVIHYQPKMTVQGEVHSLEALVRWQSPERGLIPPLDFIAYAEESGLIVPLGRWVMLDVV
RQVAKWREQGIMLRVAVNVSARQLADQTLISDLRQALADLNFTQSPIDVEITESCLIENA
DLALSVINEFSALGAEVHLDDFGTGYSSLSQLARFPLDAIKLDQSFVRDIHKQPVSQSLV
RAIVAVAQALDLQVIAEGVESEEEDAFLTQNGVDQRQGFLFAKPMTPVALARWYQHYRAG
KQTP
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacctggagaataatctgctgtaccgctattccggcgccgccagccctttc
tggcgtctgccgctggacagcaacgccttacagctcgccaccagcgaagcggcgaccacc
agccatgtggtgccgctgacgccggagcaggcggcgcagatccgcacgatgggggttatc
acctcaagcgtcacgctgtcgctgtcgctgtttggcgaactggtgccggtgcatctggtg
ggccgtaaagtctcccgcaaggagtgggctggcacggcatcagcatggaacgacacgacg
tcggtggcgcgcgatctggtgcagggactgtcgtttgccgagcaggtggtttccgaagcg
aattcggtgattgtgatactcgatcgccacggcaatattcagcgttttaaccgcctgagc
gaagaatataccggcctcaaagagcaggaagtcatcgggcaaaacgtttttaagctcttt
atgacgcccgcggaggcggccgcgtcgcgccgcaatatcaccggtttttttcgcaacggc
agctcttatgaggtcgagcgctgggtgaaaacccgcaaaggccagcgtcttttcctgttt
cgcaataaattcgtgcacagcggcagcggtcgcaacgaaattttcctgatctgctccggc
acggatatcaccgaggagcgtcgtgcacaggagcgcctgcgcacgcttgccaacaccgac
gccgtcaccggtctgccaaaccgtaacgccatccacgagatgataagcaacgctatcagc
agccgcggcgaaagccaggtcggcgtggtctatcttgatctggataatttcaaaaaagtg
aacgacgcctacggacatatgttcggcgatcaactgctccaggcggtgtcgctggcgatt
ttaagctgtcttgaaaaagaccaggtgctggcgcgtcttggcggcgacgagtttatcgtg
ctcgcgaccgacacctcgcaggccgcgctggaggcgatgtcatcgcgtatcatcacccgg
ctcaaacatccgtttcgcatcggacttattgaagtctataccggttgttcgctcggcatc
gcgctggcgccgcagcatggcgatgaccgcgaaagcgttatccgcaacgccgacacggca
atgtataccgccaaagagaacgggcgcggcaagttctgcgttttttgcccggagatgaat
cagcgggtgtttgaatacctctggcttgataccaacctgcgcaaggcgctggagaaaaac
caactggttattcactaccagcccaaaatgacggtgcagggcgaggtgcacagtctggag
gcgctcgtacgctggcagtcgccggagcgcgggctgatcccgccgctcgatttcatcgcg
tatgccgaggagtcggggcttatcgtgccgctcgggcgctgggtcatgctggacgtggtg
cgccaggtggcaaagtggcgcgagcaaggcatcatgctgcgcgtcgcggtgaacgtctcc
gcccgtcagctggccgaccagacgctgataagcgatctgcgccaggcgctcgccgatctt
aacttcacccaaagccctattgatgtggaaatcaccgaaagctgtcttatcgaaaacgcc
gatctggcgctgtcggtgattaacgaattcagcgcgttgggcgccgaagtgcatctggat
gatttcgggaccggttattcgtcgctctcgcagctggcgcgcttcccgcttgacgccatt
aagctcgaccagagctttgtgcgcgatatccataagcagccggtgtcgcagtcgctggtg
cgcgccattgtcgccgtcgcgcaggcgctggatttgcaggtgatcgccgaaggggtcgag
agcgaagaagaagatgcgtttctgacgcaaaacggcgtcgaccagcgtcagggatttctg
ttcgcaaaaccgatgactcccgtcgcgctggcacgctggtatcagcattaccgcgccgga
aaacagacgccatga
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