Cronobacter dublinensis: AFK67_17520
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Entry
AFK67_17520 CDS
T04061
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cdm
Cronobacter dublinensis
Pathway
cdm00330
Arginine and proline metabolism
cdm00480
Glutathione metabolism
cdm01100
Metabolic pathways
cdm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AFK67_17520
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AFK67_17520
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AFK67_17520
Enzymes [BR:
cdm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AFK67_17520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ALB68177
LinkDB
All DBs
Position
complement(3786475..3788613)
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AA seq
712 aa
AA seq
DB search
MKSLKIAASHAVASLLSTSRDVVTLDSTDFTDVAAVVLSVPDTRSGILALLARTGFNLPV
FVYLQEGETCALPVSGTLTGSAQGFLALETAALAYEENLLPPFFDTLTQYVEMQNSTFAC
PGHQHGEFFRKHPAGRQFYDFFGENVFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFH
ADKTYFVLNGTSAANKVVTNALLTQGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNP
FGFIGGIDERCFEEDYLRALIAEVAPSRAQETRPFRLAVIQLGTYDGTVYNARQVVDKIG
HLCDYILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHK
KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGKRLWADCVELG
IEARKAIIANCRMIKPFIPDTVAGRPWQDHPTNAIARERRFFSFEPGAAWHGFAGYAREQ
YFVDPCKLLLTTPGIDAETGEYSDFGVPAAILAHYLRENGIVPEKADLNSILFLLTPAES
AQKMAHLVAMLARFEQHIEDDTPLADVLPTICQKYPVRYKGYTLRALCQEMHNLYVSFDA
KALQREMFRKAGLPQVVMNPQQANIEYIRGNAELVRLSEAEGRVAAEGALPYPPGVLCVV
PGEVWGGAALRYFLALEEGVNLLPGFSPELQGVYSQTDPDGIKRLYGYMLRE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgttaaaaattgccgccagccacgccgtggcttctctgctttcgacctcccgc
gacgtggtgacgctcgacagcaccgattttaccgacgtggccgccgtcgtgctcagcgtg
cctgacactcgcagcggtatcctcgcgctgctcgcgcgcaccgggtttaacctgccggtt
tttgtttatttgcaggagggggaaacctgcgcgctgccggtcagcggcacgctcacaggc
agcgcgcaggggtttctggcgctcgaaaccgcagcgctggcctatgaagaaaacctgcta
ccgccgtttttcgacacactcacacagtatgtggagatgcaaaacagcacctttgcatgc
cccggccaccagcacggtgagttcttcagaaagcatccggcgggcaggcagttttacgat
ttctttggcgaaaacgtgtttcgcgccgacatgtgcaacgcggatgtgaaacttggcgat
ttgctgatccacgaaggctccgccaagcacgcgcagaagttcgccgcgaaggtatttcac
gccgataaaacctatttcgtgcttaacggcacctcggcggccaataaagtggtgaccaac
gcgctgctgacgcagggcgatctggtgctgttcgatcgcaataaccataaatccaaccac
cacggcgcgcttattcaggcgggcgcgacgccggtctatctcgaagcggcgcgcaacccg
ttcgggtttatcggcgggatcgacgagcgctgttttgaggaagattatctgcgcgcgctg
attgccgaagtggccccgtcgcgcgcgcaggagacgcgtccgttccggctggcggtcatt
cagcttggcacctacgacggcaccgtttataacgcccgtcaggtggtggataaaatcggc
cacctgtgcgactacatcctgtttgactccgcgtgggtcggctatgagcagtttatcccg
atgatggccgactgctcgccgctgctgctggagcttaacgaaaacgatccggggattttc
gtcacccagtcggtgcacaagcagcaggccgggttctcgcagacctcgcagatccacaaa
aaagataaccatattcgtggtcaggcgcgcttttgcccgcacaagcggctcaataacgcc
ttcatgctgcacgcctccaccagccccttttatccgctgttcgcggcgctggacgtcaac
gcgaaaatccacgaaggcgagagcggcaagcggctgtgggccgactgtgtggagcttggc
atcgaggcgcgcaaagcgatcatcgccaactgccggatgatcaaaccgtttattccggat
acggtagcagggcggccctggcaggatcacccgaccaacgccatcgcccgcgagcggcgc
tttttcagctttgagccgggcgcggcgtggcacggctttgccggttacgcgcgcgagcaa
tatttcgtcgacccgtgcaagctgctgctcaccacgcccggcattgacgcagaaaccggc
gagtacagcgatttcggcgtgccggcggcgatcctcgcgcattacctgcgtgaaaacggc
atcgtgccggaaaaggcggatctcaactcgatcctgtttctgctgacgcccgccgagagc
gcgcaaaaaatggcgcatctggtcgcgatgctggcgcgctttgagcagcatatcgaagac
gatacgccgcttgccgatgtgctgccgaccatctgtcagaaatacccggtacgttataaa
ggctacaccctgcgcgcgctttgccaggagatgcataacctgtatgtgagctttgacgcg
aaggcattacagcgcgagatgttccgcaaggccgggctgccgcaggtcgtgatgaacccg
cagcaggcgaacatcgagtatattcgcggcaacgcagagttggtgcgccttagcgaggcc
gaagggcgcgtggcggcggagggcgcgctgccgtacccgccgggcgtgttgtgcgtggtg
ccaggcgaagtctggggcggcgcagcgctgcgttatttcctggcgctggaagagggcgtg
aacctgttaccgggcttttcgccggagttgcagggggtttacagccagaccgatccggat
ggcatcaagcggttatacgggtatatgttgcgcgagtaa
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