Castellaniella defragrans: BN940_08556
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Entry
BN940_08556 CDS
T03058
Name
(GenBank) Protocatechuate 4,5-dioxygenase beta chain
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
cdn
Castellaniella defragrans
Pathway
cdn00362
Benzoate degradation
cdn00624
Polycyclic aromatic hydrocarbon degradation
cdn00627
Aminobenzoate degradation
cdn01100
Metabolic pathways
cdn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BN940_08556
00627 Aminobenzoate degradation
BN940_08556
00624 Polycyclic aromatic hydrocarbon degradation
BN940_08556
Enzymes [BR:
cdn01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
BN940_08556
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
CDM24174
UniProt:
W8WX97
LinkDB
All DBs
Position
1829642..1830511
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AA seq
289 aa
AA seq
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MNQTHARIGASVYTSHVPAIGAAIDLGKTGNDYWAPLFKGYEPSKQWMKDHRPDVIFLVY
NDHATAFSLDMIPTFAIGCAAQFNPADEGWGARPVPTVIGHPALAAHIAQSVIQQDFDLT
IVNKMDVDHGLTVPLSLMCGQPEAWPCPVIPFAVNVVQYPVPSGRRCFELGRAIRRAIES
YDEPLNVHIWGTGGMSHQLQGPRAGLINREFDNAFMDRLIADPAGLADVPHIDYVREAGS
EGIELVMWLIARGAMADAAGGPAPRVAHRFYHVPASNTAVGHLILEEQQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagacgcatgcccgcatcggcgcgagtgtctacacctcgcacgtgcccgcgatc
ggcgccgccatcgacctgggcaagaccggcaacgactactgggcgccgctgttcaagggc
tacgaaccgtccaagcagtggatgaaggaccatcgtcccgacgtcatcttcctggtctac
aacgaccacgccacggcgttcagcctggacatgatcccgaccttcgcgatcggctgcgcg
gcgcagttcaatccggccgacgaaggctggggcgcgcgtccggtgccgaccgtcatcggc
catccggccctggccgcgcacatcgcccagtcggtgatccagcaggacttcgacctcacc
atcgtcaacaagatggacgtggaccacggcctgacggtgccgctgtcgctgatgtgcggc
cagcccgaggcctggccctgcccggtgatccccttcgccgtcaacgtggtgcagtatccc
gtgccctcgggccgccgctgcttcgagctgggccgcgccatccgccgcgccatcgaaagc
tacgacgagcccctgaacgtgcacatctggggcacgggcggcatgagccaccagttgcag
gggccgcgcgccggcctgatcaaccgcgaattcgacaacgccttcatggaccggctgatc
gccgatccggccggcctggccgacgtgccgcacatcgactatgtgcgcgaggcgggctcg
gaaggcatcgagctggtgatgtggctgatcgcccgcggcgccatggccgatgcggcgggc
ggcccggcgccgcgcgtcgcgcaccgcttctaccacgtgccggcctcgaacacggccgtg
ggccatctgatcctggaggaacaacaatga
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