Dickeya fangzhongdai ND14b: LH89_06210
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Entry
LH89_06210 CDS
T03347
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00300
Lysine biosynthesis
ced01100
Metabolic pathways
ced01120
Microbial metabolism in diverse environments
ced01230
Biosynthesis of amino acids
Module
ced_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LH89_06210
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ced01002
]
LH89_06210
Enzymes [BR:
ced01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LH89_06210
Peptidases and inhibitors [BR:
ced01002
]
Metallo peptidases
Family M20
LH89_06210
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AIR68822
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All DBs
Position
1428136..1429263
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AA seq
375 aa
AA seq
DB search
MSCPVIELAQQLIKRPSLSPDDAGCQALMIERLQAIGFIVEKLDFGDTQNFWAWRGQGKT
LAFAGHTDVVPVGDNSQWQTPPFEPAIRDGMLYGRGAADMKGSLAAMVVAAERFVAAHPN
HQGRLAFLITSDEEASAVNGTVKVVETLMARQERLDYCLVGEPSSTDRVGDVVKNGRRGS
ITANLRIHGVQGHVAYPHLADNPVHRAMPALNELVTTVWDQGNEFFPPTSMQIANINAGT
GSNNVIPGELYVQFNFRFSTELTDELIKQQVKALLDRHQLNYTLEWQLSGHPFLTGRGEL
VDAVVNAVEHYSEITPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKVNECVSAADLQ
LLSRMYQRVMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcccggtaattgaactggcccagcagctcatcaaacgcccgtctctcagtccg
gatgatgccggctgccaggcgctcatgattgaacgcctgcaggccatcggcttcatcgtc
gaaaagctggatttcggcgatacccaaaatttctgggcctggcgcggtcagggaaaaacg
ctggcgttcgccggtcataccgacgtagtgcctgtcggtgacaacagccagtggcagacg
ccgccgtttgaacccgctattcgtgacggcatgttgtacggtcgcggcgcggcggacatg
aaaggttcgctggcggcgatggtcgtggcggcggaacgttttgtcgccgcacaccccaat
catcagggtcgactggcgtttcttatcacctccgacgaagaagccagcgccgtcaacggc
accgtcaaggtcgtggaaacgctgatggcgcgtcaggagcggctggattactgcctggtc
ggcgaaccgtccagtaccgatcgggtcggcgatgtggtgaaaaacggccggcgcggctct
atcaccgccaatctgcggattcacggcgttcagggtcatgtcgcttacccgcatctggcg
gacaacccggtgcatcgggccatgccggcgctgaatgaactggtgacgaccgtctgggac
cagggcaacgaattcttcccgcctaccagcatgcagatagccaacattaacgccggcacc
ggcagcaataacgtcattcccggcgagctatacgtgcaattcaatttccgctttagcact
gagctgaccgacgagctaattaaacagcaggtcaaagccctgcttgatcgtcaccagctt
aactacacgctggaatggcaactgtccggtcatccgttcctgaccggccgcggcgaactg
gtggatgcggtggtcaacgccgttgaacactacagtgaaattaccccacagctcctgact
accggcggcacctcggatggtcgttttattgcccgcatgggcgcacaggtggtggaactg
ggaccggtcaacgccacgattcataaagtgaacgagtgcgtcagcgccgccgacctgcaa
ctgctgagccgcatgtatcaacgcgttatggagcaattgatcgcatga
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