Dickeya fangzhongdai ND14b: LH89_06770
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Entry
LH89_06770 CDS
T03347
Name
(GenBank) tRNA s(4)U8 sulfurtransferase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00730
Thiamine metabolism
ced01100
Metabolic pathways
ced01240
Biosynthesis of cofactors
ced04122
Sulfur relay system
Module
ced_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LH89_06770
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LH89_06770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ced03016
]
LH89_06770
Enzymes [BR:
ced01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LH89_06770
Transfer RNA biogenesis [BR:
ced03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LH89_06770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AIR68930
LinkDB
All DBs
Position
complement(1558716..1560164)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKQYDETLAVVRHWDHIDVRAKDENQR
IAIRDALTRIPGIHHILEVEECAYTDVHHIFEQTLTTYREQLEGKTFCVRVKRRGKHDFS
SQDVERYVGGGLNQHIESARVNLTAPQVTVHLEIEQDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASRVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIRMARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EHEESLFDFSILERVVAEARNIDIRDIAEQTRQDVTEVETVGAFAASDILLDIRSPDEQD
ERPLALEQVEVKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcgattg
cgctttataaaaattcttaccggtaacatccgtaacgttttaaaacagtatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgacgttcgcgccaaagacgaaaatcaacgt
atagcgatacgtgatgcgttgacgcgtatcccgggcattcaccacattcttgaagtggaa
gagtgcgcttacaccgatgtccaccatatttttgaacaaacgctgaccacctaccgcgag
caactggagggtaaaaccttctgcgtgcgggtgaagcgccgcggcaagcacgatttcagc
tctcaggatgtagagcgttacgtcggcggcggactgaatcagcatatcgagagcgcgcgc
gttaatctgaccgctccgcaggtcacggtgcacctggaaatcgagcaggatcgtctgttg
ctgattaaagggcgttacgaagggatcggcggttttccgatcggcacgcaggaagacgtg
ctgtcgctgatctccggcggatttgactccggtgtttccagctacatgctgatgcgccgc
ggttgccgggtgcattactgtttcttcaatctgggcggcgccgcgcatgaaatcggcgtg
cgtcaggtcgcgcattacctgtggaaccgtttcggcagttcacaccgggtgcgctttgtc
gccattgatttcgaaccggtggtcggtgaaatcctggaaaaggtggacgacggtcagatg
ggcgtggtgctcaagcgcatgatggtgcgggcggcgtcgcgcgttgccgaacgctatggc
gtgcaggcgctggtgaccggcgaagcgctgggccaggtatccagccagacgctgaccaac
ctgcggctgattgataacgcctcggatacgctgatcctgcgtccgctgatttctcacgat
aaagagcacatcatccgcatggcgcgcgagcttggcaccgaagatttcgccaaaaccatg
cccgaatactgcggcgtgatttccaaaagcccgacggtgaaggcggtgaaggccaaaatc
gagcatgaagaaagtctgtttgatttctcgattcttgaacgggtggtagcggaagcacgt
aacatcgatatccgtgatattgccgaacagacccggcaggatgtgaccgaagtggaaacg
gttggcgcctttgccgcgagcgatattctgctggatattcgttcgccggacgagcaggat
gagcgcccgctggcgctggaacaggtagaggtaaaatcgctgccgttctacaaattgggg
acgcagttcggcgatcttgatcagagcaaaacctacctgctgtattgcgagcgcggagtg
atgagccgtttgcaggcgctgtacctgcgcgaacaagggttcaacaacgtcaaagtctat
cgtccctga
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