Dickeya fangzhongdai ND14b: LH89_11825
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Entry
LH89_11825 CDS
T03347
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00240
Pyrimidine metabolism
ced01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LH89_11825
Enzymes [BR:
ced01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
LH89_11825
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AIR69857
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All DBs
Position
complement(2675741..2676691)
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AA seq
316 aa
AA seq
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MSKTDFSHELLRFSDEVKEALHTGKPVVALESTVIAHGLPYPENVATARKIEAAVRAEGA
IPATIGIENGRFLIGMSDADIERFGSTKGIPKASSRDIPVILAQGGMGATTVASSLVAAD
LAGIPFFASAGIGGVHRGAERSMDISADLIQFTRSRVAVVCAGAKSILDLGLTLEYLETQ
CVPIISYQSDDFPAFYCRSSGFHSPHRLDDATVIARSIEMHWKLGNQSSVLITHPIHESD
AIDTDEVESIIREAAVQAEREGIRGPGATPYLMRAVAKATQGRTVKANMSVLISTAALAG
KLARAHTDYLRQQNQA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaacggatttttcgcatgagttactgcggtttagcgatgaggtaaaggaggcg
ctgcataccggtaagccggtggtggcgctggagtcgaccgtgatcgcccacggcctgcct
tatcctgagaatgtggctacggccagaaagattgaggccgctgtgcgtgccgaaggggcg
attcctgcgacgatcggcatcgaaaacggccggtttctgattggcatgtcggatgccgat
attgaacggtttggctcgaccaagggcattccgaaagccagcagccgcgatatcccggtg
attctggcgcaaggcggcatgggcgcgaccaccgtggcttcgtcgctggtggcggcggac
ctggccggcattcctttctttgcatcggcgggcatcggcggcgtgcaccgcggcgccgag
cggtcgatggatatttccgccgacctgatccagttcacccgctcccgggtcgcggtggta
tgtgccggcgccaagagtattctcgaccttggtttgacgcttgaatatctggaaacccag
tgcgtccccatcatttcctatcaatctgacgattttcccgctttttactgccgttccagc
ggttttcacagcccccatcggctggacgacgccacggtcattgcccgttccatcgagatg
cactggaagctgggtaaccagagctcggtgctgatcacccatccgattcacgaaagcgac
gccatcgacaccgatgaagtggagtcgattatccgtgaagccgccgttcaggcggaacgt
gaaggtattcgcgggccgggcgccacaccgtatctgatgcgtgccgtcgccaaagccacg
caagggcggacggtcaaggccaacatgtcggtgctgatcagtaccgccgcactggccggc
aaactggcccgcgcccataccgactacctgcggcagcaaaaccaggcataa
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