Dickeya fangzhongdai ND14b: LH89_19595
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Entry
LH89_19595 CDS
T03347
Symbol
mnmC
Name
(GenBank) FAD-dependent oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ced03016
]
LH89_19595 (mnmC)
Enzymes [BR:
ced01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
LH89_19595 (mnmC)
Transfer RNA biogenesis [BR:
ced03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LH89_19595 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_9
Pyr_redox_2
Pyr_redox_3
FAD_oxidored
NAD_binding_8
FAD_binding_2
HI0933_like
NAD_binding_7
Pyr_redox
GIDA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AIR71304
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All DBs
Position
complement(4399447..4401465)
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AA seq
672 aa
AA seq
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MTSPSIQHADLNWNAQGTPVSQQFNDVYFSNQDGLAETRYVFLQGNGFPQRFPDHPGPVC
TVAETGFGTGLNFLTLWQAFEQFRQQQPDAALQRLHFISFEKFPLRQSDLAAAHASWPEL
APFADELRRHWPLALPGCHRLILAQGRITLDLWFGDVNALLPKLDNSLTRRIDAWFLDGF
APAKNPDMWTDALFHAMARLCRSGGTFATFTAAGFVRRGLQQAGFDVSKIKGFGQKREML
CGAVSHSSEQPHPTPWYARPAATHPQDVAIVGGGVAAVLTALALLRRGARVTLYCADEQV
GQRASGNRQGALYPLLNDKQDALSGFFATAFGFARRCYDALAAQGVTFEHDWCGVSQLAY
DEKSTRKITQILAGNWPETLVRPADARTLTEQAGVPLHTHGLTYPQGGWLCPAELTASAL
ALACRQGLQAHLSTAVAALAHTDSGWQLTLADGRQRQHATVVLANGHQLSDWEQTRHLPV
YAVRGQVSHVPDTPSLSALRQVLCYDGYLTPVSPHHHTHCIGASYHRGDTDTDYRETDQQ
QNRQRLIDCLPDSDWPAAVDISGQQARCGVRCAIRDHLPLLGQVPDYPQTLTCYQDLPER
LADGDEVAAAPSWPNLYLIGALGSRGLCSAPLAAEILASQLFGEPLPLDSDTLAALHPNR
FWVRKLLKGKAV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagcccttccatccagcatgcagacctgaactggaacgctcagggtacacctgta
tcgcaacagtttaatgacgtttatttctccaatcaggatggcctggcggaaacccgctac
gtctttctgcagggcaacggttttccacagcgtttccccgaccatcccggcccggtctgc
accgtggcggaaaccggcttcggcaccgggctgaatttcctgacgctgtggcaggcgttc
gaacagtttcgccagcaacaaccggacgccgcgctgcaacggctgcacttcatcagtttt
gagaaatttccgctgcgccagtcggatctggccgccgcgcacgccagttggccagaactg
gcgcctttcgccgacgaactacgtcggcactggccgctggcgctgcccggttgtcaccgg
ctgattctggcgcaggggcgcatcacgctggacctgtggttcggcgacgtcaacgccctg
ctgcccaaactggacaacagcctgacccggcgtatcgacgcctggtttctcgacgggttc
gccccggccaaaaatccggacatgtggaccgatgcgttatttcacgccatggcgcgcttg
tgtcgcagcggagggacgttcgcgacctttaccgcggccggttttgtgcgccggggattg
caacaggcgggatttgacgtcagcaaaatcaagggattcggtcagaaacgggaaatgctg
tgcggcgcggtgtcgcacagcagtgaacagccgcaccccactccctggtacgcgcgtcct
gcggccacccacccgcaggatgtggcgattgtcggcggcggcgtcgcggcggtactgacg
gcgctcgcgctgctgcgacgcggcgcgcgggtgacgctgtactgcgccgacgaacaggtg
ggacaacgcgcctccggcaatcgtcagggcgcgctttatccgctgctgaacgacaagcag
gatgcgttatcgggatttttcgctaccgcgttcggcttcgcccgccgctgctacgacgcc
ctcgccgcgcaaggcgtgacgtttgaacacgactggtgcggcgtcagccaactggcttac
gatgaaaaaagcacgcgcaaaataacccagatactggccggcaactggccggagacgctg
gtacgcccggcggacgcgcgcaccctgaccgaacaggccggcgtaccgctgcacacccac
ggcctcacctacccgcagggcggctggctgtgcccggccgagttgaccgcatcggccttg
gcgctggcctgccggcagggccttcaggcgcatttatctaccgccgtcgccgcgctcgcc
cacaccgacagcggctggcagctgacgctggcggacggccgtcagcgacaacacgccacg
gtggtattggccaacggtcatcagctaagcgactgggagcagacccgccacctgcccgtc
tacgcggtgcgcggtcaggtcagccatgtccccgacacgccgtcgctgtccgcgctgcgt
caggtgctgtgctacgatggctatctgacgccggtcagcccgcatcaccacacgcactgt
atcggcgccagctatcatcgcggcgatacggatacggattaccgtgaaaccgatcaacag
cagaaccgtcaacgactgattgattgtctgcccgacagtgactggcccgccgcggtggac
atctctgggcaacaggcgcgttgcggcgtgcgatgcgcgatccgcgatcatctgccgttg
ctgggtcaggtgccggattacccacagacactgacgtgttatcaggatctgccagaacgg
ctggctgacggcgacgaagtagccgccgccccgtcctggccgaatctctacctgattggc
gcgttggggtcacgcggtttatgctctgcgccgctggccgccgaaatactggcatcgcag
ttgttcggcgaaccgctgccgctggacagcgatacgctggcggcgctgcaccccaatcga
ttttgggtgagaaaactgctgaaaggcaaagcggtataa
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