Cellvibrio sp. KY-YJ-3: D0B88_13495
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Entry
D0B88_13495 CDS
T06234
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cek
Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:
cek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cek03009
]
D0B88_13495 (rimO)
Enzymes [BR:
cek01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D0B88_13495 (rimO)
Ribosome biogenesis [BR:
cek03009
]
Prokaryotic type
ribosomal protein modification factors
D0B88_13495 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
DUF5005
Motif
Other DBs
NCBI-ProteinID:
QEY13176
LinkDB
All DBs
Position
complement(3187157..3188560)
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AA seq
467 aa
AA seq
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MTVNTFDPSQTTTLDTPAKTLASQAQTGSSKGNTIGFVSLGCPKNLVDSERILTQLRTEG
YNIVPTYNDADMVIVNTCGFIDSAVQESLGAIGEALAENGKVLVTGCLGAKKDEIIQVHP
NVLGITGAHAYEEVLSQVHEHLPPNPSHNPFTDLVPPQGIKLTPRHYAYLKISEGCNHSC
SFCIIPDMRGKLVSRPIGQVMGEAERLVKAGVKELLVISQDTSAYGVDIKHRTDFWDGRP
LKTDMYQLAAALGELGVWVRLHYVYPYLHVDNVIPLMAQGKVLPYLDIPFQHASPTLLRK
MRRPGQVEQTLERIKSWREQVPNLTIRSTFIVGFPGETEDDFQQLLDFLQEAQLDRVGCF
QYSPVEGAKANDLPDHVPDEIKQERYDRFMQLQQKISTERLKQKVGQVLQVLIDEVDEEG
AIGRSFADAPEIDGCVYLNGEENVKAGDLINVLIEHSDEYDLWGTKV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaataccttcgacccttcacaaaccaccaccttggatactccagccaaaacg
ttggcaagccaagcacaaactggtagcagcaaaggcaatactattggttttgtgtcgctc
ggctgccctaagaacctggtggattcagagcgtattcttacccagttacgcaccgagggt
tacaacatagtacccacctataacgatgccgatatggtgattgtaaacacctgcggtttt
atcgatagcgcggtacaggaatcgctgggagcaattggtgaggccttggcggaaaatggc
aaggtgctggtgaccggttgtttgggcgctaaaaaggacgaaatcattcaagttcaccct
aatgttctgggcattaccggcgcacacgcctatgaagaggtgctgtcgcaagtgcatgaa
cacttgccacccaatccaagccataacccgtttactgatctggtgccgccgcagggcatc
aagctcactccgcgtcactatgcttatttaaaaatctccgaaggctgcaatcactcctgc
agcttttgcattatccccgacatgcgcggcaaacttgtgagccgtccgattggccaagta
atgggtgaggcggaacgcttggttaaagccggcgttaaagaactattggtgatttcgcaa
gacacctctgcctacggcgtagatatcaaacaccgcacggatttctgggatggccgacca
ctcaaaaccgatatgtaccagttagccgctgcactgggcgaattgggcgtgtgggttcgc
ctgcattatgtttacccctatttgcatgtagataacgtgatcccactgatggcgcagggc
aaggtactgccttatttggatattccgttccagcacgcaagcccaaccttgttacgtaaa
atgcgccgcccaggtcaggttgaacaaaccctggagcgcatcaagagctggcgcgaacag
gtgccgaacctgaccattcgctcgacctttattgttggcttccccggtgaaacagaagac
gacttccaacaattgctcgacttcctgcaagaagcgcaattggatcgtgttggttgtttc
cagtattcgcccgttgaaggcgccaaagccaacgacttgccagatcacgtgccggatgag
atcaaacaagagcgctatgatcgctttatgcaattacagcaaaaaatctctactgagcgt
ttaaaacagaaagtagggcaggtattgcaggtattgattgatgaagttgatgaagagggc
gccattggccgcagctttgcggatgcaccggaaatcgacggctgtgtttatttaaacggc
gaagagaatgtaaaagccggtgatttgatcaatgtattgatcgagcactcggatgagtac
gatttgtggggcaccaaggtttaa
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