Caenorhabditis elegans (nematode): CELE_F14B4.3
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Entry
CELE_F14B4.3 CDS
T00019
Symbol
rpoa-2
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 homolog
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CELE_F14B4.3 (rpoa-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_F14B4.3 (rpoa-2)
Enzymes [BR:
cel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CELE_F14B4.3 (rpoa-2)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CELE_F14B4.3 (rpoa-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
172752
NCBI-ProteinID:
NP_492476
WormBase:
WBGene00008781
Ensembl:
WBGene00008781
UniProt:
Q27493
LinkDB
All DBs
Position
I:complement(9280923..9286576)
Genome browser
AA seq
1127 aa
AA seq
DB search
MDCDIASYHVDSFDFLVSKGCQFAAQAVPAEKFRLKNGDAVTMKFTSAQLHKPTLDTGAK
LTSDTLPLLPAECRQRGLTYAGNLKVGIDVHVNGSRLDIIEIILGKVPIMLRSEGCHLRG
MSRKELVVAGEEPIEKGGYFIVNGSEKVIRLLIANRRNFPIAIIRKTFKEKGKLFSEFGV
MMRSVKENHTAVMMTLHYLDTGTMQLALQFRREIFYVPLMYIVKALTDKNDAVISAGFKR
GRNQDQFYSSCILNMLAQCQEEEILNQEAAIRAIGSRFRVAVSDRVAPWEDDLEAGRFII
RECVLIHLDSDEEKFHTLAYMTQKLIALVKGECAPETPDNPQFQEASVSGHILLLILRER
MENIIGMVRRKLEYMSSRKDFILTSAAILKALGNHTGGEITRGMAYFLATGNLVTRVGLA
LQQESGFSVIAERINQLRFVSHFRAIHRGAFFMEMRTTDVRKLRPEAWGFICPVHTPDGA
PCGLLNHVTASCRIVTDLSDNSNVPSLLAELGMYTHKTVALAPPGEELYPVLMNGRFLGY
VPITKAASIERYLRCAKVAKDARIPYTSEIALVRRSTDIKNIQTQYPGIYILSDAGRLIR
PVRNLAMDAVEHIGTFEQVYLSVVLDPEEAEPGVTMHQELHPSCLFSFAGNLIPFPDHNQ
SPRNVYQCQMGKQTMGTAVHAWHSRADNKMYRLQFPQQPMLKLEAYEKYEMDEYPLGTNA
CVAVISYTGYDMEDAMTINKASYQRGFAHGTVIKVERINLVTERERKTIFYRNPREEIKT
VGPDGLPIPGRRYFLDEVYYVTFNMETGDFRTHKFHYAEPAYCGLVRIVEQGEGDSGAKH
ALIQWRIERNPIIGDKFASRHGQKGINSFLWPVESLPFSETGMVPDIIFNPHGFPSRMTI
GMMIESMAGKAAATHGENYDASPFVFNEDNTAINHFGELLTKAGYNYYGNETFYSGVDGR
QMEMQIFFGIVYYQRLRHMIADKFQVRATGPIDPITHQPVKGRKKGGGIRFGEMERDAII
AHGTSFVLQDRLLNCSDRDVAYACRRCGSLLSVLMSSRAGSHLLKKKRKDDEPLDYTETQ
RCRTCDKDDQVFLLQVPRVFRYLTAELAAMNVKIKLGIEHPSKVTGS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggactgcgacatagcgtcgtatcatgtcgattcattcgattttcttgtttcaaaagga
tgtcaatttgctgcccaagctgttcctgcagaaaaattccgtctgaaaaacggcgatgct
gttacaatgaagttcacgtcggctcaacttcataagccaacgctagataccggagcgaag
ctcaccagtgacactcttcctttacttcccgcggaatgtcgacaacgtggactgacatat
gctggaaatttaaaagttggaatcgatgtccatgtgaacggaagccggttggacattatt
gaaattattttgggaaaggtaccaattatgctccgatccgaaggttgccatctccgtgga
atgtctcgaaaggaacttgtagttgccggtgaagagccaatcgaaaaaggaggatatttc
attgtaaatggatcagaaaaagtgattagattgctgatcgcgaatcgaagaaactttcca
atcgcaattatcagaaaaacattcaaagagaaaggaaaattgttctcggaatttggagtt
atgatgagaagtgttaaggaaaatcatacggctgtaatgatgactcttcattatttggac
actggaactatgcagttagcacttcaattcagacgggaaatcttttatgtaccgttgatg
tatattgtgaaggctttaactgataagaatgatgcagtgattagtgctggattcaaaaga
ggaagaaatcaagatcaattctattcatcttgcattctcaatatgcttgctcaatgtcaa
gaagaagaaattttgaatcaagaagccgccattagagccatcggttctcgtttcagagta
gccgtatctgatagagttgctccatgggaagatgatcttgaagctggtcgattcatcatt
cgggaatgtgtacttatacatttggatagtgatgaagagaaattccatactcttgcgtac
atgacacagaaactcattgcacttgtgaaaggagaatgtgctccagagacacctgataat
ccacaattccaagaggcctctgtttcaggacatattcttttgttgattctgagagaacga
atggagaatatcattggaatggttaggagaaaattggagtacatgagttcaaggaaggac
ttcattttgacatccgccgctattctaaaagcacttggaaatcatactggtggtgaaatc
actcgtggaatggcatatttccttgcaacaggaaatcttgtgactcgtgtcggtcttgct
cttcaacaagaatctggtttctcagttatcgctgaaagaatcaatcaacttcgtttcgtt
tctcacttccgtgcaattcatcgtggtgcattctttatggaaatgcgaaccacagatgtt
agaaaattgagaccagaagcatggggatttatttgtcctgtacacactcctgatggagct
ccatgtggtttattgaatcacgtaactgcatcatgtagaattgtcactgatctctctgat
aattcaaatgttccgtcgcttcttgctgaattgggaatgtatacacacaaaactgttgca
ttggcaccgccaggtgaagagctttatccagttctaatgaatggaagattccttggatat
gttccaattactaaagctgcttcaattgagagatatctacgatgtgcaaaagttgcgaaa
gatgcaagaattccttatacttcggagattgcacttgttcgtcgatccacggatatcaag
aatattcaaactcaatatccaggaatctacattctcagtgacgctggacgtctcattcgt
ccagtacgtaatctagcaatggatgctgttgaacatatcggaacttttgaacaagtttat
ctctcagttgtacttgatccagaagaggctgaaccaggagtcactatgcatcaagaattg
catccttcttgcttattttcatttgctggaaatttaattcctttcccagatcataatcag
tcaccacgtaatgtgtaccaatgtcaaatgggtaaacaaacgatgggaaccgccgtacat
gcatggcattcacgtgctgacaacaaaatgtatcgtctacaatttccacaacaaccaatg
ctaaaactggaggcttatgagaaatacgaaatggatgaatatccattgggtacaaatgct
tgtgttgctgtgatctcctatacaggatatgatatggaagatgctatgacaatcaataaa
gcatcatatcaaagaggttttgcacatggaacagttatcaaagtggagagaattaatttg
gtgaccgagagagaacgaaaaacgattttctatagaaatccccgagaagaaatcaaaacc
gttggaccagatggtttgccgattccaggaagacgatatttcctcgatgaagtgtattat
gtcacattcaatatggaaactggagatttcagaactcataaattccattacgctgaaccg
gcatattgtggtttggtgagaattgttgaacaaggagaaggcgattctggtgcaaaacat
gctttgattcaatggagaattgagagaaatccaattatcggtgataaattcgcttcgaga
cacggacaaaaaggaattaattcattcctatggcctgttgaatcacttccattctcagaa
accggtatggtacctgatattattttcaatcctcacggtttcccatctcggatgacaatc
ggtatgatgattgagagtatggctggaaaagcggcagctacgcacggagagaattatgat
gcatcgccatttgttttcaatgaagacaacacagcaatcaaccattttggagaattactc
acaaaagcaggttataattactacggtaacgaaacattttattcgggagttgatggacgt
caaatggagatgcaaatcttctttggaattgtttattatcaaagacttcgtcatatgatt
gctgataaattccaagtgagagccactggaccaattgatccaattactcatcaaccagta
aaaggaagaaaaaagggaggaggtattcgatttggagaaatggaaagagatgctattatt
gcacatggaacatctttcgtgttgcaggaccgtcttctcaactgttcggatcgtgacgta
gcatacgcttgtcgtcgttgtggatccctattgtccgtgttgatgtccagtcgtgcagga
tcacatttattgaaaaagaaaaggaaagacgacgaaccattggactacacggaaactcaa
cgatgtcgtacgtgtgataaagatgatcaagttttcctgcttcaagttcctcgtgtcttc
cgttatttgactgccgagttagctgcaatgaatgtgaaaatcaagttgggcatcgaacat
ccatccaaagtaactggaagttaa
DBGET
integrated database retrieval system