Caenorhabditis elegans (nematode): CELE_H43I07.2
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Entry
CELE_H43I07.2 CDS
T00019
Symbol
rpac-40
Name
(RefSeq) DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CELE_H43I07.2 (rpac-40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_H43I07.2 (rpac-40)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CELE_H43I07.2 (rpac-40)
RNA polymerase I system
RNA polymerase I
CELE_H43I07.2 (rpac-40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
178823
NCBI-ProteinID:
NP_504166
WormBase:
WBGene00019275
Ensembl:
WBGene00019275
UniProt:
Q9UAY9
LinkDB
All DBs
Position
V:4199485..4203696
Genome browser
AA seq
366 aa
AA seq
DB search
MVKKAAATSKQATYHSDEIEMKEEVVLNTYDECTDYVEYDDTKQFDINEYCDQIQVAMVN
ESDDGMTLEFDITRIEAPIANALRRVLIAEVPTMALEKIYLYQNTSVIQDEVLCHRLGLL
PLRVDPRGFQFPKEKVVGINEKGVDCDEEPEGDPAKNLIFKINVSCTKNRNAVPTATDPK
QLYHNSSVYSRAFEWVPIADQKTQFTEEAHPRMVSDDILVAKLRPGQEIEASCHAVKGIG
RDHAKFSPVATASYRLLPTIRLNAEISGEAAERLKSVFSEGVIAIEKKGAKRIAVVKDAR
KDTCSRNVFRHEDLSKVVQLGKNKQHFIFSVESTGALKSSELVVEACKVMEIKCRSLRKQ
IEALIQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaaaagcggcggcaactagcaagcaggctacctatcacagtgatgagatcgag
atgaaagaggaagttgtgctcaatacctacgacgaatgcaccgattatgtcgaatacgac
gatacaaaacaattcgatatcaacgagtattgcgatcaaatccaagtggcaatggtcaat
gaatccgacgatggaatgacattggaatttgatattactcgcattgaagctccaattgca
aatgctcttcgccgtgtgctcatcgccgaagtgccaacgatggctctcgagaagatttat
ctctatcagaatacttctgtaattcaagatgaagtactctgccatcgtttgggtcttctg
ccgcttcgtgtggatccacgtggatttcagtttccaaaggaaaaagtcgttggaatcaat
gagaagggagtggattgtgacgaggagcccgagggagatcccgcgaaaaatttgatcttc
aagattaatgtttcgtgtacgaagaatcgaaatgcggtgccgacggctaccgatccgaag
cagctttatcacaatagctcggtctactcacgtgcttttgaatgggtaccgattgctgat
cagaagacgcaattcaccgaagaagcccatccacgtatggtttctgatgatattctcgtt
gccaagcttcgtcctggacaggaaattgaagccagttgccatgcggtcaagggaatcgga
cgggatcatgcaaagttctcaccggttgctactgcgtcctatagactgcttccaacgatc
cgcttgaacgccgaaatttcgggtgaagctgccgaacgtctcaaatcagtattcagcgag
ggagttattgctatcgagaagaaaggagccaaacgaattgctgttgtcaaggatgctcgc
aaggatacgtgcagtcgtaacgtgttccgccacgaagatctgtcgaaagttgttcaattg
ggaaagaacaaacagcatttcattttcagtgtagagtcgactggagctctgaaatcgtct
gaattggtggttgaagcctgtaaagtcatggaaatcaagtgtcgttctcttcgcaaacaa
atcgaggctcttattcaataa
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