Caenorhabditis elegans (nematode): CELE_T01C3.10
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Entry
CELE_T01C3.10 CDS
T00019
Symbol
nmr-2
Name
(RefSeq) PBPe domain-containing protein
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04020
Calcium signaling pathway
cel04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
CELE_T01C3.10 (nmr-2)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
CELE_T01C3.10 (nmr-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cel04040
]
CELE_T01C3.10 (nmr-2)
Ion channels [BR:
cel04040
]
Ligand-gated channels
Glutamate (ionotropic)
CELE_T01C3.10 (nmr-2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
eIF3g
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
180002
NCBI-ProteinID:
NP_001256640
WormBase:
WBGene00003775
Ensembl:
WBGene00003775
UniProt:
G5EEH3
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All DBs
Position
V:complement(<15006341..>15011660)
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AA seq
990 aa
AA seq
DB search
MKHRIWFILLLLATFFEKNQSIDLGGSRKVQKPKEDPKREDVNIAVVYQHYAGRSKSYDK
AFKEVIRKINDATAVSSLRRLATRYNFQAVDCILPTGTFFVKEVLDCLCNNVTSNNVALI
IFVTASETYDSTTAAEQYFLTAASYTGIPIIAWNADNAGFTFENDLGPYRIIQMAPPIEH
QARAMLALLRRYNWPKFGVVTSEMAGNDRFVTAIREELELFSNKSTKFEMIHFSHMNTKN
DTDVDLKLADVKKNQAKIILLYANAAQAGTIFSHAEKMDMIGEKYLWIGTQSVKGTQTTV
KAPAQAGMLCVNFHTVSNAMFAPRDDILPLIIQLAPKLFGAALLQLRPNEMFSLKSNVSC
KSEDGDPYWDNGKYIYEHMKAAFVKGNPFHVDDGHDSFFYTFEKTGRLRNSILQISNLRT
NSKGEKTWEKVGIFTNNELKMADVQWPGEKANPPQGAADKFHVKVVTLHEPPFIAVSDVD
PDTQKCPGNQGSICDWGDVEYTDGAGVKKNRTLLKCCSGYCVDLLNKLANDIGFTYTLYK
VRDEKWGLKTENGWNGLIADLMHNKADMCVTSLKLNSERARDIDFSLPFLDTGISIIVKI
RSGVLSPTAFLEPFEYSTWVIILFVCIHVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLF
RSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMITRVQYYDL
SGIHDPMLNFPHDQKPPFRFGTVDGGNTHETMKRNWHKMHEYVKHNKYFRMNISAGIEAV
KNEELDAFIYDAVVLDYWAGKDANCALMTVGKWASMTGYGIGFPKNSPHTSLVNHYMLQY
QQKGDLERLQNFWLTGACTPDSHSQTQSAPLGIENFLSAFVLLAGGIIVSVIVLGFEHIY
CMHLRKPLQKIDPNGWCGIISMAMGKSLTFTEAVDRVQEWRSRTQSLASTNSPQLKRRRS
ANLRPTEEPFNQDLNPPRRSPRFLQVETNL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacagaatttggtttattcttcttttacttgcaactttcttcgaaaaaaatcag
tcgattgatttgggaggaagccgtaaagttcaaaagccaaaggaggatccaaaaagagaa
gatgtgaatattgctgtcgtgtatcagcattacgctggccgctcgaaatcctacgacaaa
gcttttaaggaagttattcgaaaaatcaatgacgccactgcagtatcaagtctccgacgc
cttgctacacgatacaacttccaagcagtcgactgtattcttccgactggaacatttttt
gtcaaagaagttctagattgtctttgcaataatgtcacctcaaataacgtagctcttatc
atttttgtaacagcgtcagagacatatgactcaactaccgctgctgagcaatatttcttg
actgcagcaagttatacgggaattccaataattgcttggaacgctgacaacgctggattc
acatttgaaaatgatttgggtccgtatagaattattcaaatggctccgccaattgagcat
caggctagagcaatgcttgcacttcttagacgatacaactggccaaaatttggggtggtt
acatctgaaatggctggaaatgatcgttttgtgactgcgattcgagaagagctggaatta
ttttccaataaatctacaaaattcgaaatgattcacttttctcatatgaacacaaaaaat
gataccgacgttgacttaaagttggcagatgtgaagaaaaatcaagcgaaaattatttta
ttgtacgcaaatgcggctcaagcagggacaattttttcgcacgctgaaaaaatggatatg
atcggagaaaaatatctgtggatcggcactcaatcagtgaaaggcacacaaactacggtg
aaagctccggctcaggctggaatgctttgtgtcaattttcatacagtatccaatgcaatg
tttgctccgcgtgatgacatcctccctcttatcattcaacttgcaccaaaactttttgga
gccgctttgcttcaactacgacccaacgaaatgttctcgttgaaatcgaatgtatcgtgc
aaaagtgaagatggtgatccatattgggacaatgggaaatatatttatgaacacatgaaa
gcagcatttgtaaagggaaatccattccacgtggatgacggtcatgactcgtttttctac
acttttgagaaaaccggacggttgagaaactcgattcttcaaatctcaaatttgagaact
aattcgaaaggtgaaaaaacttgggaaaaagtaggaattttcacaaataacgagttgaaa
atggcggatgttcaatggccgggcgaaaaggccaatccacctcagggagcagctgacaag
tttcacgtgaaagtggtcactctgcatgaaccaccattcatcgctgtatctgatgttgat
cctgacacacagaaatgtccaggaaatcagggatccatctgtgattggggagatgtcgag
tatactgatggcgctggcgttaagaaaaatcgaacacttttaaaatgttgttctggatat
tgtgtagatcttctcaacaaacttgcaaatgatattggattcacttacactttatacaaa
gtacgagacgagaaatggggactgaagactgaaaatggatggaatgggcttatagctgat
ttgatgcacaataaggcagatatgtgtgttacttcattgaagttaaactcggaacgagca
cgagatattgacttttcccttccatttttggatactggaatttcaataattgtaaaaatt
cgaagcggagttctatctccaactgcttttctagaaccttttgagtattcaacatgggtt
attattctatttgtttgcatccacgtggcagcaatctcgatatttttattcgaatgggtg
tcaccatactcattcaatatgcaaaaatatcccccgccagagcataaattctcattattt
cgatcatattggctcgtgtgggcgacattgttcagtgcaagtgtatccacagatgttccc
aaatctacagtatcccgattgatggctctcgtttgggcagcttttggtctaacttttttg
gcagtttacacggctaacttggcggcatttatgatcacacgtgttcaatattatgatttg
agtggaatacatgatcctatgttaaacttcccacatgatcaaaaaccaccatttcgattt
ggtacagttgatggtggtaacactcatgagactatgaaacggaattggcacaaaatgcac
gaatacgtgaagcataacaaatatttccgaatgaacatttccgcgggaatagaagctgtc
aaaaatgaagaactcgatgcttttatctatgacgctgtggtgcttgactactgggctgga
aaagatgcaaattgtgcattgatgacagttggtaaatgggcaagtatgacaggttacggt
attggatttccaaagaactcaccgcacacttctctagtcaatcattacatgctgcagtat
cagcagaaaggtgacttggaacgtcttcaaaacttctggctcaccggagcatgtacacca
gacagtcacagtcaaacccagtcagcaccgcttggaatcgagaattttctatcggcattt
gtgctgttagccggtggaatcatcgtcagcgtcattgttcttggatttgagcacatttat
tgcatgcaccttcggaagcctctacaaaagattgatccgaatggttggtgtggaattatc
agtatggctatgggaaaatctttgacattcacggaagctgttgatcgagttcaagaatgg
aggtcgaggacacaatcgttggcgagtacgaattctccgcaattaaaacgacgacgatct
gcgaatttaagaccaactgaagaaccattcaatcaagatctgaacccgccaagaagaagc
ccccgttttttgcaagtcgaaaccaatctttga
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