Caenorhabditis elegans (nematode): CELE_Y39G10AL.3
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Entry
CELE_Y39G10AL.3 CDS
T00019
Symbol
cdk-7
Name
(RefSeq) Cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03022
Basal transcription factors
cel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CELE_Y39G10AL.3 (cdk-7)
09124 Replication and repair
03420 Nucleotide excision repair
CELE_Y39G10AL.3 (cdk-7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cel01001
]
CELE_Y39G10AL.3 (cdk-7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_Y39G10AL.3 (cdk-7)
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_Y39G10AL.3 (cdk-7)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_Y39G10AL.3 (cdk-7)
Enzymes [BR:
cel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
CELE_Y39G10AL.3 (cdk-7)
2.7.11.23 [RNA-polymerase]-subunit kinase
CELE_Y39G10AL.3 (cdk-7)
Protein kinases [BR:
cel01001
]
Serine/threonine kinases: CMGC group
CDK family
CELE_Y39G10AL.3 (cdk-7)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CELE_Y39G10AL.3 (cdk-7)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
CELE_Y39G10AL.3 (cdk-7)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CELE_Y39G10AL.3 (cdk-7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Kinase-like
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
171784
NCBI-ProteinID:
NP_001370652
WormBase:
WBGene00000408
Ensembl:
WBGene00000408
LinkDB
All DBs
Position
I:complement(2281504..2289753)
Genome browser
AA seq
330 aa
AA seq
DB search
MSRRYDTIKHLGEGQFANVYLAQDLESGECVAIKKIKLGSREEAKDGINRTAIREIKLLK
EIHHDNIIGLRDVIGHRTSIQLVFDFMDTDLEHVIKDKEIILMPAHIKNITMQMLLGLEF
LHVHWILHRDLKPNNLLMNKMGRVKLTDFGLARFFGSPNRNYTHQVVTRWYRAPELLFGA
RSYGVGIDIWSVGCIIAELLLRNPIFPGESDIDQLVKIFNILGCPTPETWPNMTEMNSYV
IIKPQTEYMALNYYFSAAPQDLLDLMAGMWTFDPIKRLTCTQSLQMEYFRTQPFCCLDEE
LPLPKKQQPQKRSRRLDDDGTRPVRRLNFD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacgttacgatacaataaagcatcttggagaaggacaattcgccaacgtttat
ctcgcacaagacctcgaatcgggcgaatgtgtggctattaaaaaaatcaaactaggatcg
agagaagaagcaaaagatggaatcaatcgaacggcgattcgagagattaaacttttgaag
gaaattcatcatgacaatattatcgggttacgagatgtgattggacatcgaacaagtatt
caactggttttcgactttatggatacagatctcgaacatgtgattaaggataaagaaatt
attctaatgccagcacatatcaaaaatattacgatgcaaatgcttctgggactcgaattt
ctacacgttcactggattcttcacagagatctgaagccaaataacctgctgatgaacaaa
atgggacgcgtgaagctcaccgatttcggtttggctcgattcttcggatctccaaacaga
aattacactcatcaggttgtgacaagatggtatcgagcccctgagttgctctttggagca
cgttcctatggagttggaattgatatttggtcggttggatgtatcattgccgaattgttg
ttgagaaatccaatattccctggtgaaagtgacattgatcaactcgtgaaaatcttcaat
attctcggatgtccaacaccagaaacatggccaaatatgactgaaatgaacagttatgtc
attattaaaccacagacggagtatatggctctaaattactatttctcggctgctccgcaa
gatttgctcgatttgatggcgggaatgtggacatttgacccaataaaacgtctgacttgt
actcaatctcttcaaatggaatatttccgaactcaaccattctgctgccttgacgaagag
cttccacttccgaaaaaacaacagccacagaagagatctcgacggcttgacgacgatgga
actcgccccgttcgacgattgaattttgattaa
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integrated database retrieval system
