Cedecea neteri ND14a: LH86_16860
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Entry
LH86_16860 CDS
T03337
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
cen
Cedecea neteri ND14a
Pathway
cen02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH86_16860
Enzymes [BR:
cen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LH86_16860
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
GGDEF_2
DUF4478
Motif
Other DBs
NCBI-ProteinID:
AIR66693
LinkDB
All DBs
Position
3553205..3555196
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AA seq
663 aa
AA seq
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MKDDLEQNLLYRYLGTTSPYWRLPADSNALQLAASEDSDTGQVVALDMIQADEIRQMTVI
TSSLTMTLSLFGIEVPVHMVGRKVSKREWAGTASAWHDTHSVARDLVQGLSFAEQVVSEA
NSVIVILDKQGNIQRFNRLSEEYTGMKEHEVIGQNVFKLFMSRSEAAASRRNISGFFRNG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIYDLITEAIAKRGDTQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLEEGQVLARLGGDEFIVLATNTSQGSLEAMSSRILTRLKQPFRIGLIEVYSGCSLGI
SLAPQHGDERENLIRNADTAMYTAKESGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKMTWRGEVRSLEALVRWQSPERGLIPPQGFISYAEESGLIVPLGRWVMVSVV
QQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPIDVELTESCLIENE
ELALSVIKQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDVHKHSVSQSLV
RAIVAVAQALNLQVIAEGVENQKEDAFLTKNGVNERQGFLFAKPMPAAVFERWFKRYQAR
TKR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgatttggagcagaacctgctttatcgttatctggggacgaccagcccctac
tggcgtttaccggcagacagcaacgcccttcaacttgcggccagcgaagattcagacacc
ggccaggtcgtcgcgctggacatgatacaggccgacgaaattcgccagatgacggtgatt
acgtccagcctgaccatgacattgtcgctgttcggcatagaagtcccggtgcatatggtc
ggccgcaaagtgtccaaacgcgagtgggcgggcaccgcctcggcctggcatgacacccat
tcggtggctcgcgatctggtgcagggcctctcttttgccgagcaggttgtctctgaagcg
aattcagtcattgtcattcttgataaacagggaaacattcagcgcttcaaccggctaagc
gaagaatacaccgggatgaaagagcatgaggtcatcgggcagaacgtctttaagctgttt
atgagccgcagcgaagccgccgcctccagacgcaatatcagcggattttttcgcaacggc
agctcctatgaagttgagcgttgggtcaaaacccgtaaaggccagcggctgtttttgttc
cgcaacaagtttgtccacagcggcagcggcaaaaacgaaatctacctgatttgctccggc
accgacattaccgaagagcgccgcgcgcaggaacgactgcgggtgctggccaataccgat
accattaccgggctgcctaaccgcaacgccatttacgacctgatcaccgaggccatcgcc
aaacggggtgacacgcaggttggcatcgtctatctggatctcgataactttaaaaaagtg
aacgatgcctacggccatatgtttggcgatcagctgctgcaggccgtgtcgctggcgatt
ttaagctgccttgaagaaggccaggtgctggcgcgcctcggaggcgatgaatttatcgtg
ctggcaaccaacacctctcagggctcgctggaagcgatgtcttctcgcattctgacccgc
ctgaaacagcccttcaggattggcctgatcgaggtctacagcggctgttcgctgggtatc
tctctcgccccgcaacacggggatgaacgagagaatctgattcgtaacgccgacaccgcc
atgtacaccgccaaagagagcggccgcgggaagttttgcgtgttctcgcccgagatgaac
cagcgggtgtttgagtatttatggctggataccaatctgcggaaagcgctggataacgat
cagctggtgattcattaccagccgaaaatgacctggcgcggtgaagtccgtagcctggaa
gcactggtacgctggcaatcgccggagcgcgggctgatccctccccagggctttatctcc
tacgccgaagagtccggcctgattgtgccgcttgggcgctgggtgatggttagcgtcgtg
cagcaggtagcgaaatggcgggacaaagggattaatttacgcgtggcagtcaatgtctct
gcccgacagcttgccgaccagactatttttagcgatctcaagcaggcgctgaaggatctg
aactttgagtactgcccgattgatgttgagctgaccgagagctgtctaatcgaaaacgaa
gagctggcgctgtcggttatcaagcagtttagtcagctaggggcgcaggtgcatctggat
gacttcggcacggggtattcgtccttatcacagctggcccgtttccctatcgacgccatt
aagctcgatcagtcctttgtgcgcgacgtgcataaacactcggtgtctcagtcgctggtg
agagcgattgtggccgtggcgcaggcactgaatttacaggtcattgcagagggcgtagag
aaccaaaaagaagacgcctttcttaccaagaacggcgtcaacgaacggcaggggttctta
ttcgccaaaccaatgcccgctgccgtgttcgagcgttggtttaagcgctatcaggccaga
acaaagcgctag
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