Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_0993
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Entry
RGRSB_0993 CDS
T05747
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00860
Porphyrin metabolism
cer01100
Metabolic pathways
cer01110
Biosynthesis of secondary metabolites
cer01120
Microbial metabolism in diverse environments
cer01240
Biosynthesis of cofactors
Module
cer_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RGRSB_0993 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cer04147
]
RGRSB_0993 (hemB)
Enzymes [BR:
cer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
RGRSB_0993 (hemB)
Exosome [BR:
cer04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RGRSB_0993 (hemB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
BBA79496
UniProt:
A0A2Z5T2H2
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All DBs
Position
complement(1556191..1557177)
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AA seq
328 aa
AA seq
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MFPINRPRRLRQTIQLRRMVRETILTANDLIYPLFAVPGNKIATEVKSMPGVYQLSVDKI
VDEAKEVYDLGIPSIILFGIPRTKDVAATGAWHDHGIIQQAATAIKEAVPNLVVIVDTCL
CEYTNHGHCGYLEVGDLSGRVLNDPTLELLKKTAVSQARAGADIIAPSGMMDGFVQAVRQ
GLDEAGFNDTLVLSYAAKYASAYYGPFRDAAESSPKFGDRCTYQMDPGNAREALKEVKLD
IEEGADILMVKPALSYMDVIWRVKELTYLPVAAYNVSGEYSMVKAAALNGWIDEKKVILE
TLTSFKRAGADLILTYHAKDAVQWLREV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgattaatcgccctcgtcgtctacgtcaaaccatccaactgcgccgcatggtg
cgagaaacaattctaacagccaatgatttaatttaccctttattcgctgttcctgggaat
aagatcgccacagaagttaagtctatgccaggagtttatcaactctcggtagataaaatt
gttgacgaagccaaagaggtttacgatctaggcattccgtctattattctttttggtatt
cctagaactaaggatgttgcagcgacgggagcttggcatgatcatggaataattcagcag
gcagctactgccattaaagaagcagttcccaatttagtagtcattgtcgacacttgttta
tgtgaatacaccaatcacggtcactgtggctatctagaagtaggggatctaagtggacga
gtccttaatgatcctactttagagttactgaagaaaacggcagtttcccaagcaagggca
ggggctgacattattgctccgtcagggatgatggatggatttgtccaagcggttcgacag
gggttagatgaagcaggatttaatgatactcttgttctttcctatgctgctaaatatgct
tctgcttactatggtcctttccgtgatgcggctgaatcttctcctaaatttggagatcgg
tgtacttatcagatggacccaggaaatgctcgagaagccctcaaagaagtgaaattagat
atcgaagaaggagcggatatattgatggttaaacctgctttatcctatatggatgtaatc
tggcgtgttaaagaactaacttaccttcctgtagcagcttacaatgtttctggggagtat
tctatggtcaaggcggcagcccttaatggttggattgacgagaaaaaagtgattctagaa
actctaactagtttcaaacgggcaggggccgatttgatcctgacttaccatgccaaagat
gcggtacagtggctaagagaagtttga
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