Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1370
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Entry
RGRSB_1370 CDS
T05747
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cer
Cyanobacterium endosymbiont of Rhopalodia gibberula
Brite
KEGG Orthology (KO) [BR:
cer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cer03009
]
RGRSB_1370
Enzymes [BR:
cer01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RGRSB_1370
Ribosome biogenesis [BR:
cer03009
]
Prokaryotic type
ribosomal protein modification factors
RGRSB_1370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBA79811
UniProt:
A0A2Z5SZV9
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All DBs
Position
2147544..2148887
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AA seq
447 aa
AA seq
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MGSKPTIAISHLGCEKNRIDSEHMLGLLAQAGYQIDSSEELADYVIVNTCSFIQEARQES
VRTLVELAEAKKKIIISGCMAQHFQVELLDEIPEAVAVIGTGDYQKIVDVIRQVETGKKV
KEVSVNPTFIADETVPRYRTTTEGVAYLRIAEGCDYRCAFCIIPHLRGNQRSRSIESIVA
EAQQLAEQRVQELILISQITTNYGLDLYGEPRLDQLLRALGTVDIPWIRIYYAYPTGLTN
KVINAIRDTQNVLPYFDFPLQHSHPAILKAMNRPWQEQVNNGIIEQLRRSIPEAVLRTTF
IVGFPGETEEYFNHLVNFVECNEFDHVGVFTFSPEERTPAYQMPYQVPSEIAQQRREILM
QVQQPISLKKNQDYVGEIVDVLIEQERPQTREKIGRFWRFAPEVDGLVYIQGEAPLNEIV
SVKITYADTYDLYGKIVQQHNVLEIDS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtaagccaactattgcgatttctcacctaggctgcgaaaagaaccgtattgac
tctgaacatatgctaggcttgctggcgcaggcgggctatcaaatagatagtagtgaagaa
ttagcagactacgtaattgttaatacttgtagtttcatacaggaggctcgccaagagtca
gttcgtacattggtagaattagccgaagccaagaaaaaaattattatctctggctgtatg
gcacaacactttcaagtagaacttcttgatgagattcctgaggccgtcgctgtgatagga
acgggagactatcaaaaaattgttgatgttatccgacaggtggaaacaggaaaaaaagtt
aaagaagtctcagttaatcctacttttatcgcggacgaaacagttcctcgctaccgtaca
accactgaaggggtggcttatttgcggatagcagaagggtgtgattaccgttgcgcattt
tgtatcattcctcacttgagaggaaatcagcgatcacgttctattgaatcgattgtcgcc
gaagcacaacaattagctgagcaaagagtacaagaattaatattgatttcccaaatcacc
acaaattatggattggatttgtatggagaacccagactagaccaattattgagggctttg
ggaacagtagacataccctggattcggatttattatgcttatcctacaggactcaccaat
aaggtgattaacgcaattagagacacccaaaacgttttaccctatttcgattttcctttg
caacattcccacccggctatcttaaaagcgatgaatcgtccttggcaggaacaggtcaat
aatggcatcattgaacagctcagaaggtctattcctgaagccgtattgagaacaactttt
attgtgggttttcccggagaaacagaggaatattttaaccatttagttaattttgtcgaa
tgtaatgaatttgatcacgttggagtatttactttttctccagaagaaagaactcctgct
tatcagatgccctatcaggttccgtcagaaatagcccaacaaagacgagaaatcttgatg
caggtgcaacagccaatttctctcaaaaaaaatcaagattatgttggagaaatcgttgac
gttttaattgaacaagaaaggcctcaaactagggagaaaatagggcgtttttggcgattt
gcgccggaagtagacggtcttgtttatattcaaggagaagctcccttaaacgaaattgtg
tctgttaaaatcacctatgctgatacctacgacttatatggaaagattgtgcaacaacac
aatgttctagaaatagattcttga
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