Canis lupus familiaris (dog): 100856298
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Entry
100856298 CDS
T01007
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100856298 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
100856298 (POLR1B)
Enzymes [BR:
cfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100856298 (POLR1B)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100856298 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
100856298
NCBI-ProteinID:
XP_003639648
Ensembl:
ENSCAFG00000007174
VGNC:
44789
LinkDB
All DBs
Position
17:36543712..36568761
Genome browser
AA seq
1135 aa
AA seq
DB search
MDAPGRWQNLPSGPSLKHLTDPSYGIPQEQQKPALQELTRAHVESFNYAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPMVPKGNICKELNIYPAECRGRRSTYRGKLTADISW
AVNGISKGIIKQFLGYIPIMVKSKLCNLHSLPPKALIEHHEEVEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEEDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGERFRVKLSLPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKMESWLVSIKIALDKRSQKTNVSINTENLMRIF
NLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQCVYTASVPTLLCSLGVT
PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPSIAESLRHFKVLKEKRIPPWMEVALIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNIAIFEDEVLAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQARSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGARLQYGDPYYSYLNLNTGESFVTY
YKSKENCIVDNIKVCSNDTGNGRFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
YFGELLKAAGYNFYGTERLYSGISGIELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCDRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccccggccggtggcagaatctgcccagcgggcctagcctaaagcacttgact
gacccgtcttacggaatcccgcaggagcagcaaaagccagcgttgcaggaactgacacgg
gcgcacgtcgagtccttcaactacgcggtccgcgaggggctcagccacgcggtgcaggct
atacctccctttgaatttgctttcaaagatgagcggatctctcttactattgtggatgct
gtcatcagtccacccatggttccaaaagggaacatctgcaaagagctcaacatttatcca
gcagaatgccggggccggaggagtacctaccgtggcaagttgacagctgacatcagctgg
gcagtgaatggaatctcaaaaggaatcattaaacagtttcttggttacattcccatcatg
gtgaagtctaagctctgcaacttacacagtcttccccccaaagccctcattgagcaccat
gaagaagtagaggaaatgggaggctattttataattaatggcattgaaaaagtcatccga
atgttgattatgcctcggaggaatttccccattgcaatgataagaccaaaatggaaaacc
agagggcctggctatactcagtatggagtctccatgcactgtgtgagggaggaacattct
gctgtcaacatgaaccttcactacttggaaaatggcacggtcatgttgaactttatttat
cggaaagaactcttttttcttcctttgggatttgcacttaaggcacttgtcagtttctcc
gattatcagatttttcaggagctcatcaaaggcaaagaggaggactctttctttagaaac
tcagtttctcagatgttaaggatcgtaatggaagagggttgttccacacaaaaacaggtc
cttaactatctaggtgaacgcttcagagtaaagctcagtctccctgactggtatccaaat
gaacaagctgcagaatttctgtttaaccagtgcatctgtatccacttgaaatccaatact
gagaagttttatatgctttgtctcatgacacggaaactctttgctttagccaaaggagag
tgcatggaagacaatcctgatagtttagtgaaccaagaagtcctcacacctggtcaactc
ttccttatgtttctgaaggaaaaaatggaatcttggttagtgtctattaaaatagctcta
gataagaggtctcagaagacaaatgtgtccataaacactgaaaatttgatgaggattttt
aatctgggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctgcgt
tctaaaacaggtcttggcttcctgcaagattctggactttgtgttgtggctgataagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggggctgattttgccaag
atgaggaccaccacagtacgcaggctgctgccagagtcctggggtttcctttgtcctgtg
cacaccccagatggggagccctgtggcctgatgaaccacttgaccgctgtgtgcgaggtt
gtcacacaatgtgtgtatacggcatctgttcccactttgctctgcagcttgggggtcact
ccagttgatggagctccacatcgaccctacagcgagtgctaccctgtcctgctagatggc
gtcatggttggctgggtggataaggagcttgctcctagcattgcagagtctctccgacat
tttaaggtattaaaagaaaaaagaattcctccctggatggaagtggcccttatccctatg
acaggaaaaccaagtttatacccaggattgttcctgtttaccactccttgtagattggta
cggcctgtgcagaacttggaattaggcaaagaagaactaattggaactatggaacagatc
ttcatgaacattgccatctttgaggatgaggttttggctggagttaccactcaccaggag
ctcttccctcacagcctgctgagtgtgattgccaacttcatccccttctccgatcacaac
cagagtccccgaaatatgtatcagtgccagatggggaagcaaactatgggctttccactt
ctcacctaccaagcccgatcagataataaactgtatcgtcttcagaccccacaaagccct
ttagtgagaccatacatgtatgattattatgacatggataactatccaattgggacaaat
gccatcgttgctgttatttcttacactgggtatgatatggaagatgccatgattgtgaat
aaagcctcctgggaacgaggctttgcccatggaagtgtctacaagtccgagttcatagat
ctctctgaaaaaattaaacaaggagatgatagtctggtgtttggtgtcaagcctggggac
ccacggattttgcagaagttagatgatgatggattgccatttattggagcacggctgcag
tatggagatccatattatagttacctgaacctcaacaccggggaaagctttgtgacgtac
tataagagtaaagaaaattgcattgtggataacatcaaagtgtgtagtaatgacactggc
aatgggagattcaagtgtgtttgcatcacgatgagagtccctcggaacccaaccattgga
gataaatttgctagccgtcatgggcaaaagggcatcttgagcaggttgtggccagttgag
gacatgccatttactgagagtgggatggtcccagacattctgttcaatcctcatggtttt
ccctcccgcatgactattggtatgttaattgaaagtatggcagggaagtctgctgctttg
cacggtctctgccatgatgctacacccttcaccttttcagaagagaactcggccttagaa
tactttggtgagctgttaaaagctgctggctacaacttctatggcactgagaggttgtat
agtggcatcagtgggatagaactggaagcagacattttcataggtgtggtttattatcaa
cgtttacgccacatggtctcagacaaattccaagttagaaccacaggagccagagacaaa
gtcactaaccagcccattgggggaagaaacgtacagggtggaatccgttttggggaaatg
gagcgggatgctctcttagctcatggtacatcatttctccttcacgaccgcctcttcaac
tgttcagatcgatcggtagcccatgtctgtgtcaagtgtggtagtttactctctccactg
ttggagaagccacctccttcttggtctgccatgcgcaacagaaaatacaactgtactttg
tgtgaccgcagtgatactatcgacactgtttctgtgccttatgttttccggtattttgta
gctgaactggcagctatgaacatcaaagtgaaattggatgttgtttaa
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integrated database retrieval system
