Kaistella faecalis: LL667_10640
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Entry
LL667_10640 CDS
T08247
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cfae
Kaistella faecalis
Pathway
cfae03030
DNA replication
cfae03410
Base excision repair
cfae03420
Nucleotide excision repair
cfae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LL667_10640 (polA)
03410 Base excision repair
LL667_10640 (polA)
03420 Nucleotide excision repair
LL667_10640 (polA)
03440 Homologous recombination
LL667_10640 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfae03032
]
LL667_10640 (polA)
03400 DNA repair and recombination proteins [BR:
cfae03400
]
LL667_10640 (polA)
Enzymes [BR:
cfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LL667_10640 (polA)
DNA replication proteins [BR:
cfae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LL667_10640 (polA)
DNA repair and recombination proteins [BR:
cfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LL667_10640 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LL667_10640 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
HHH_5
RNase_H_2
ACS_CODH_B_C
Motif
Other DBs
NCBI-ProteinID:
UFK97410
LinkDB
All DBs
Position
2266922..2269756
Genome browser
AA seq
944 aa
AA seq
DB search
MSHNNDKRLFLIDAYAMIFRGYYALIRSPRMTSDGKDTSAIFGFTNSLIELIRRERPTHL
AVVFDVGQASVRTVDFAEYKANRSETPEAIKIAIPYIHRILEAMHVPILGVEGYEADDVI
GTIACKAEKEGYTTFMVTPDKDFAQLVTDKIKIYKPGLKGAEFEILGVEEVKAKYEIEDP
KQVIDYLAMMGDSVDNIPGLDGVGEKTAKKFLKEYGSIENLLANTHEIKGKLREKVEASA
ERGILSKKLATIICDSPIEFHQEQYDLETPDFEKVRIVFEEIEFRRLYENLYRAFAPAIP
AAPGIISDEKAEPAVPLGNLGAAARQLDLFASYEDLDQATTTKSNIVENDHLYQYIDSPK
AQKILVQNLLTQQAVSFDTETTTLNEMDAELIGMSFSYKKGLAYYIPLSENREEVLSTLE
IFRPFFEKKEILKIAHNLKFDYKVLKQYGIQIEGAVFDTMIAHYLLNPDGRHGMDYLAEM
YLHYKPVSIETLVGKGKNQGTLRSVSLEEQTNYVAEDADITLQLYHIFGPQLEKENLQDL
FYKVEMPLMKVLAKMELEGVSLDRNWLEQESKDLENDLRELEKNIFELSGEEFNMNSPKQ
LGEVLFEKMQLDPKAKKTKTGQYSTSEDVLQKLSGKHEIIKHILEHRTYQKLKSTYVDAL
PLQIDKDDHRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVAGEGKKIISA
DYSQIELRLIAEISNEENMILAFQNGEDIHASTASKLFNVPLEEVTKTQRSQAKTVNFGI
IYGQGAFALAEQTGLSRTEAKHMIEAYFETYPQLKKYMAEQVKKAQDLGYVETILHRKRH
LKDINSANFVVKAHAERNAVNAPIQGSAADVIKLAMIRIDEKLTEQNLQTKMLLQVHDEL
LFEAPAEEVETAKSLIKTEMESAFETKVPLLVEVGVGDNWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacaacaacgataaaagacttttcctcatcgatgcttatgcgatgattttccgt
gggtattatgcattaatacgcagtccgcggatgacaagtgacggaaaagatacctctgca
atattcggatttaccaattctttaatcgagcttatccgccgggaaagaccgacgcatttg
gcggtagttttcgatgtcggtcaggcgagtgtccgtactgtagatttcgctgaatataag
gcgaacagaagcgaaactccggaagccataaaaattgccattccttatattcacaggatc
ctggaagcgatgcatgttccgattttgggggttgaaggttacgaggctgatgacgtcata
ggaacaattgcctgtaaagcagaaaaagaagggtataccacctttatggtgacaccggat
aaggattttgcgcagttggtaaccgataaaattaaaatctacaaacccggtctaaaaggt
gcggagtttgaaattttgggcgttgaggaagtaaaggcaaaatacgaaattgaagatccc
aaacaggtgattgattaccttgcaatgatgggtgattccgtggataatattcccggcctg
gacggtgttggagagaagacagccaagaaatttctgaaagaatacggaagtattgaaaac
ctgctcgccaatacccatgaaattaaaggcaaactacgcgagaaagtggaagccagtgct
gaacgcggaattttatctaaaaaattagcgacgattatctgtgattcacccattgagttc
catcaggaacagtatgaccttgaaactccggattttgaaaaagtaagaattgtttttgag
gaaattgaattccgcagactctacgaaaacctgtaccgtgcttttgcaccggcaattccc
gcagctccgggcataatttccgatgaaaaggcggaaccagctgtcccgttagggaatctg
ggagccgcggccagacagctagacctgtttgcgagttatgaagatctggatcaggctacc
acgaccaagtcgaatatcgtagagaacgatcatctttaccagtatatcgattctcccaaa
gcgcagaaaatattggttcagaatctactcacacagcaggctgtcagttttgatacagaa
acgaccacactgaacgaaatggatgccgaattgattgggatgagtttctcctataaaaaa
gggttggcgtactatattccgctttccgaaaatagggaagaagttttgtcaacacttgaa
atcttccggccgttttttgagaagaaggaaattcttaaaattgcccataatttaaaattc
gattataaagttctgaaacagtacggaatacaaatcgaaggagctgtttttgataccatg
atcgctcattatctcctgaatcctgacggaagacacggcatggattatttggcggaaatg
tacctgcattacaaacctgtttccatcgaaactttagtagggaaaggaaaaaatcaggga
accctgcgttcagtttctttggaagagcagaccaattatgtcgccgaagatgctgatatt
accctgcagctctatcatattttcgggccgcagcttgaaaaagaaaatcttcaggattta
ttctataaagtagaaatgccgctgatgaaagttcttgcaaaaatggaacttgaaggtgtg
tcgcttgatagaaactggctcgaacaggaaagtaaagacctggaaaatgatctgagggaa
ctcgaaaaaaatatttttgaactgtccggcgaagaatttaatatgaattccccgaaacag
cttggtgaagttttatttgaaaaaatgcagcttgatcccaaagccaagaaaaccaaaacc
ggacaatattccacctccgaagatgttttgcagaaactttcaggtaagcacgaaatcatc
aaacatattctcgaacacaggacgtatcagaaacttaaatccacttatgtggacgcactg
cctttacagatcgataaagacgatcaccgcgttcataccaatttttcacagacgacagca
gcaacaggacgtcttgcttctgtgaatccgaatcttcagaatatcccgatccgtaccttg
cgcggacagcagattcggggtgcttttgtagcgggagaaggaaagaagatcatttctgcc
gattattcacagatcgaacttaggcttattgccgaaatttccaatgaggaaaatatgatt
ctggcattccagaacggtgaggatattcacgcttccacggcttcaaaactttttaatgtt
ccattggaggaagtgaccaaaacgcagcgaagtcaggcgaaaacagtgaattttggaatt
atttacggacagggcgcttttgctctggcggaacagaccggcctttcgcgaaccgaggca
aaacatatgatcgaggcttatttcgaaacctatccgcagcttaaaaagtatatggctgaa
caggtaaagaaagcccaggatttaggttacgtggaaacaattctgcaccgtaagcgtcat
ttgaaagacatcaattctgccaattttgtagtcaaagcacacgcggaaagaaacgccgta
aacgcaccgatccagggaagcgccgccgatgtgataaaactcgccatgatcaggattgac
gaaaaacttacagaacagaatttacaaaccaaaatgctgcttcaggtgcatgatgaactt
ctgtttgaagctcctgctgaagaagtggaaacagcaaaaagtttaatcaaaaccgaaatg
gagtccgcatttgaaaccaaagttcctttgctggtggaagtgggtgttggtgataactgg
ctggaagcacattaa
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